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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636670
OOKJ01002625
144739
Gammaproteobacteria
GGG
Pro
>WENV183636651
OOKJ01000746
307413
Gammaproteobacteria
TTT
Lys
>WENV183636657
OOKJ01000865
95576
Gammaproteobacteria
TAG
Leu
>WENV183636613
OOKJ01000068
144732
Gammaproteobacteria
TCT
Arg
>WENV183636663
OOKJ01001430
31879
Gammaproteobacteria
GGA
Ser
>WENV183636664
OOKJ01001430
31879
Gammaproteobacteria
GGA
Ser
>WENV183636658
OOKJ01000865
402043
Gammaproteobacteria
TTG
Gln
>WENV183636618
OOKJ01000080
73589
Gammaproteobacteria
CAG
Leu
>WENV183636675
OOKJ01007095
73589
Gammaproteobacteria
CAG
Leu
>WENV183636676
OOKJ01007095
73589
Gammaproteobacteria
CAG
Leu
>WENV183636677
OOKJ01007095
73589
Gammaproteobacteria
CAG
Leu
>WENV183636661
OOKJ01001147
315638
Gammaproteobacteria
TAC
Val
>WENV183636611
OOKJ01000063
95575
Gammaproteobacteria
>WENV183636628
OOKJ01000155
52367
Gammaproteobacteria
TGA
Ser
>WENV183636692
OOKJ01107032
411785
Gammaproteobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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