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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183646812
OQVR01016781
196621
Bacillota
GTC
Asp
>WENV183647150
OQVR01074608
144612
Bacillota
TCT
Arg
>WENV183646786
OQVR01015111
318890
Bacillota
TGC
Ala
>WENV183647000
OQVR01038174
235134
Bacillota
GAA
Phe
>WENV183646864
OQVR01020275
156189
Bacillota
GAT
Ile
>WENV183646402
OQVR01002237
235098
Bacillota
GAC
Val
>WENV183646664
OQVR01009949
44854
Bacillota
TGA
Ser
>WENV183646353
OQVR01001749
304022
Bacillota
GCC
Gly
>WENV183646361
OQVR01001787
307003
Bacillota
TGC
Ala
>WENV183646526
OQVR01004929
340802
Bacillota
TTG
Gln
>WENV183646849
OQVR01019198
11034
Bacillota
GGA
Ser
>WENV183646312
OQVR01001260
274189
Bacillota
TGT
Thr
>WENV183646352
OQVR01001749
235079
Bacillota
GAA
Phe
>WENV183647065
OQVR01051620
173314
Bacillota
GAT
Ile
>WENV183646390
OQVR01002067
338149
Bacillota
CTC
Glu
>WENV183647005
OQVR01038378
169968
Bacillota
CAT
Met
>WENV183647036
OQVR01045834
413152
Bacillota
TCC
Gly
>WENV183647098
OQVR01058317
152492
Bacillota
GGG
Pro
>WENV183647089
OQVR01056491
153911
Bacillota
GAT
Ile
>WENV183646525
OQVR01004929
144610
Bacillota
GTG
His
>WENV183646650
OQVR01009218
240017
Bacillota
GCC
Gly
>WENV183646641
OQVR01008762
411547
Bacillota
CTG
Gln
>WENV183646643
OQVR01008967
147684
Bacillota
ACG
Arg
>WENV183646665
OQVR01009949
4624
Bacillota
GCT
Ser
>WENV183646400
OQVR01002185
235095
Bacillota
GGT
Thr
>WENV183646828
OQVR01018068
419639
Bacillota
GCA
Cys
>WENV183646512
OQVR01004484
411549
Bacillota
TTG
Gln
>WENV183646546
OQVR01005445
148188
Bacillota
CCG
Arg
>WENV183646930
OQVR01027620
256380
Bacillota
>WENV183646445
OQVR01002906
163943
Bacillota
GTC
Asp
>WENV183646539
OQVR01005188
235124
Bacillota
TGG
Pro
>WENV183646269
OQVR01000849
338129
Bacillota
TGT
Thr
>WENV183646648
OQVR01009218
157838
Bacillota
GTC
Asp
>WENV183646350
OQVR01001715
144583
Bacillota
ACG
Arg
>WENV183646375
OQVR01001903
236037
Bacillota
GTG
His
>WENV183646844
OQVR01019061
247734
Bacillota
TGC
Ala
>WENV183647136
OQVR01068456
235171
Bacillota
CCA
Trp
>WENV183646721
OQVR01012464
144621
Bacillota
GTT
Asn
>WENV183646950
OQVR01030359
353527
Bacillota
TTC
Glu
>WENV183646846
OQVR01019062
58712
Bacillota
CAG
Leu
>WENV183646304
OQVR01001199
245296
Bacillota
CCC
Gly
>WENV183646391
OQVR01002067
272992
Bacillota
CTT
Lys
>WENV183646140
OQVR01000141
344240
Bacillota
GCC
Gly
>WENV183646370
OQVR01001843
344240
Bacillota
GCC
Gly
>WENV183646865
OQVR01020323
299139
Bacillota
TGC
Ala
>WENV183647064
OQVR01051620
299139
Bacillota
TGC
Ala
>WENV183646463
OQVR01003290
144594
Bacillota
CAC
Val
>WENV183646705
OQVR01011629
272488
Bacillota
GAA
Phe
>WENV183646521
OQVR01004868
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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