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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183659588
OQWM01036390
339630
Bacillota
GCC
Gly
>WENV183658692
OQWM01004766
37213
Bacillota
TGA
Ser
>WENV183658519
OQWM01002928
144612
Bacillota
TCT
Arg
>WENV183659785
OQWM01055281
144612
Bacillota
TCT
Arg
>WENV183660102
OQWM01123813
154063
Bacillota
CGG
Pro
>WENV183658672
OQWM01004457
235134
Bacillota
GAA
Phe
>WENV183659937
OQWM01081045
156189
Bacillota
GAT
Ile
>WENV183658980
OQWM01009328
156189
Bacillota
GAT
Ile
>WENV183658647
OQWM01004240
235098
Bacillota
GAC
Val
>WENV183659015
OQWM01010206
235098
Bacillota
GAC
Val
>WENV183659501
OQWM01028985
235098
Bacillota
GAC
Val
>WENV183658084
OQWM01000232
152156
Bacillota
TGG
Pro
>WENV183658355
OQWM01001686
44854
Bacillota
TGA
Ser
>WENV183659115
OQWM01012768
44854
Bacillota
TGA
Ser
>WENV183659189
OQWM01015184
44854
Bacillota
TGA
Ser
>WENV183659258
OQWM01017161
44854
Bacillota
TGA
Ser
>WENV183659530
OQWM01031603
44854
Bacillota
TGA
Ser
>WENV183659459
OQWM01026305
148348
Bacillota
GTC
Asp
>WENV183658517
OQWM01002926
347827
Bacillota
TTC
Glu
>WENV183658910
OQWM01007869
347827
Bacillota
TTC
Glu
>WENV183658939
OQWM01008515
347827
Bacillota
TTC
Glu
>WENV183659132
OQWM01013409
347827
Bacillota
TTC
Glu
>WENV183659342
OQWM01020412
59312
Bacillota
CAG
Leu
>WENV183659833
OQWM01064325
59312
Bacillota
CAG
Leu
>WENV183659967
OQWM01087883
243346
Bacillota
TGC
Ala
>WENV183659151
OQWM01013968
338147
Bacillota
CTC
Glu
>WENV183659702
OQWM01046023
155273
Bacillota
CAT
Met
>WENV183659432
OQWM01024323
235294
Bacillota
TGC
Ala
>WENV183658766
OQWM01005733
340802
Bacillota
TTG
Gln
>WENV183659496
OQWM01028741
144668
Bacillota
GTC
Asp
>WENV183659625
OQWM01039093
44859
Bacillota
AAG
Leu
>WENV183658434
OQWM01002220
11034
Bacillota
GGA
Ser
>WENV183658643
OQWM01004174
235117
Bacillota
TAC
Val
>WENV183659805
OQWM01059667
247057
Bacillota
TGC
Ala
>WENV183658642
OQWM01004174
338440
Bacillota
TTC
Glu
>WENV183658903
OQWM01007774
338149
Bacillota
CTC
Glu
>WENV183659204
OQWM01015556
413152
Bacillota
TCC
Gly
>WENV183660129
OQWM01131743
413152
Bacillota
TCC
Gly
>WENV183659395
OQWM01022266
152492
Bacillota
GGG
Pro
>WENV183659736
OQWM01048778
152492
Bacillota
GGG
Pro
>WENV183659888
OQWM01071225
153911
Bacillota
GAT
Ile
>WENV183658765
OQWM01005733
144610
Bacillota
GTG
His
>WENV183658073
OQWM01000212
240017
Bacillota
GCC
Gly
>WENV183658113
OQWM01000335
240017
Bacillota
GCC
Gly
>WENV183658673
OQWM01004457
240017
Bacillota
GCC
Gly
>WENV183658482
OQWM01002656
411547
Bacillota
CTG
Gln
>WENV183659417
OQWM01023385
147684
Bacillota
ACG
Arg
>WENV183658356
OQWM01001686
4624
Bacillota
GCT
Ser
>WENV183659116
OQWM01012768
4624
Bacillota
GCT
Ser
>WENV183659190
OQWM01015184
4624
Bacillota
GCT
Ser
>WENV183659259
OQWM01017161
4624
Bacillota
GCT
Ser
>WENV183659531
OQWM01031603
4624
Bacillota
GCT
Ser
>WENV183658208
OQWM01000734
248683
Bacillota
TTT
Lys
>WENV183658772
OQWM01005776
235095
Bacillota
GGT
Thr
>WENV183659139
OQWM01013601
235095
Bacillota
GGT
Thr
>WENV183659626
OQWM01039109
235095
Bacillota
GGT
Thr
>WENV183658496
OQWM01002763
241471
Bacillota
TGC
Ala
>WENV183659730
OQWM01048061
154748
Bacillota
GTC
Asp
>WENV183660135
OQWM01133665
411549
Bacillota
TTG
Gln
>WENV183659581
OQWM01035868
235142
Bacillota
CTT
Lys
>WENV183659043
OQWM01011000
245386
Bacillota
CCA
Trp
>WENV183659776
OQWM01054127
148188
Bacillota
CCG
Arg
>WENV183659845
OQWM01064819
80612
Bacillota
GTA
Tyr
>WENV183658070
OQWM01000212
249522
Bacillota
TAC
Val
>WENV183658110
OQWM01000335
249522
Bacillota
TAC
Val
>WENV183658518
OQWM01002926
249522
Bacillota
TAC
Val
>WENV183658670
OQWM01004457
249522
Bacillota
TAC
Val
>WENV183659333
OQWM01020087
249522
Bacillota
TAC
Val
>WENV183659949
OQWM01083914
249522
Bacillota
TAC
Val
>WENV183658989
OQWM01009594
235124
Bacillota
TGG
Pro
>WENV183658633
OQWM01004014
338129
Bacillota
TGT
Thr
>WENV183658071
OQWM01000212
157838
Bacillota
GTC
Asp
>WENV183658111
OQWM01000335
157838
Bacillota
GTC
Asp
>WENV183659430
OQWM01024236
144583
Bacillota
ACG
Arg
>WENV183659728
OQWM01048034
347851
Bacillota
TTC
Glu
>WENV183658146
OQWM01000440
236037
Bacillota
GTG
His
>WENV183659996
OQWM01094480
127572
Bacillota
ACG
Arg
>WENV183659137
OQWM01013601
235171
Bacillota
CCA
Trp
>WENV183659448
OQWM01025542
235171
Bacillota
CCA
Trp
>WENV183658156
OQWM01000503
144621
Bacillota
GTT
Asn
>WENV183658904
OQWM01007774
144621
Bacillota
GTT
Asn
>WENV183658374
OQWM01001780
243098
Bacillota
GGT
Thr
>WENV183658209
OQWM01000765
58712
Bacillota
CAG
Leu
>WENV183658845
OQWM01006760
58712
Bacillota
CAG
Leu
>WENV183659510
OQWM01030101
58712
Bacillota
CAG
Leu
>WENV183658433
OQWM01002218
245296
Bacillota
CCC
Gly
>WENV183659435
OQWM01024866
245296
Bacillota
CCC
Gly
>WENV183659727
OQWM01048034
239078
Bacillota
TTT
Lys
>WENV183658441
OQWM01002246
344240
Bacillota
GCC
Gly
>WENV183659393
OQWM01022187
248965
Bacillota
GCC
Gly
>WENV183658764
OQWM01005733
157635
Bacillota
TCT
Arg
>WENV183659535
OQWM01031676
238945
Bacillota
GCC
Gly
>WENV183659326
OQWM01019860
249259
Bacillota
GCC
Gly
>WENV183659721
OQWM01047826
238857
Bacillota
CCA
Trp
>WENV183658469
OQWM01002451
338128
Bacillota
TTC
Glu
>WENV183658543
OQWM01003080
338128
Bacillota
TTC
Glu
>WENV183658786
OQWM01005975
338128
Bacillota
TTC
Glu
>WENV183658803
OQWM01006096
338128
Bacillota
TTC
Glu
>WENV183659482
OQWM01027745
338128
Bacillota
TTC
Glu
>WENV183659172
OQWM01014602
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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