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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741843
PJUG01026960
349303
Alphaproteobacteria
GCC
Gly
>WENV183741771
PJUG01008602
96238
Alphaproteobacteria
GAG
Leu
>WENV183741835
PJUG01023252
267922
Alphaproteobacteria
CCA
Trp
>WENV183741779
PJUG01010842
144964
Alphaproteobacteria
TGG
Pro
>WENV183741720
PJUG01002366
145498
Alphaproteobacteria
TGG
Pro
>WENV183741737
PJUG01004839
339490
Alphaproteobacteria
GAC
Val
>WENV183741709
PJUG01001995
23842
Alphaproteobacteria
CGA
Ser
>WENV183741702
PJUG01001796
426379
Alphaproteobacteria
GCA
Cys
>WENV183741654
PJUG01000352
145497
Alphaproteobacteria
GTG
His
>WENV183741821
PJUG01020747
175860
Alphaproteobacteria
CCT
Arg
>WENV183741776
PJUG01009611
339306
Alphaproteobacteria
>WENV183741739
PJUG01004877
159404
Alphaproteobacteria
GTG
His
>WENV183741798
PJUG01015117
23789
Alphaproteobacteria
TGA
Ser
>WENV183741806
PJUG01016761
236045
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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