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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183748062
PPFU01009351
145315
Bacteroidota
CAT
Met
>WENV183749841
PPFU01219602
151513
Bacteroidota
TGC
Ala
>WENV183749822
PPFU01217963
179643
Bacteroidota
GTC
Asp
>WENV183749312
PPFU01149180
338625
Bacteroidota
TTC
Glu
>WENV183748408
PPFU01035742
273242
Bacteroidota
CCA
Trp
>WENV183750279
PPFU01280969
150103
Bacteroidota
GTG
His
>WENV183748878
PPFU01092041
150103
Bacteroidota
GTG
His
>WENV183748334
PPFU01029088
127414
Bacteroidota
TGG
Pro
>WENV183748127
PPFU01013453
197066
Bacteroidota
GTT
Asn
>WENV183748563
PPFU01053155
149691
Bacteroidota
GTT
Asn
>WENV183748202
PPFU01019052
171336
Bacteroidota
GGC
Ala
>WENV183750520
PPFU01315596
274593
Bacteroidota
TTG
Gln
>WENV183748063
PPFU01009507
17987
Bacteroidota
GGA
Ser
>WENV183748299
PPFU01026541
235802
Bacteroidota
CAT
Met
>WENV183748292
PPFU01025904
242597
Bacteroidota
GAA
Phe
>WENV183748386
PPFU01034220
150454
Bacteroidota
TGT
Thr
>WENV183749138
PPFU01125446
150454
Bacteroidota
TGT
Thr
>WENV183749188
PPFU01133210
150454
Bacteroidota
TGT
Thr
>WENV183748335
PPFU01029088
145408
Bacteroidota
TCT
Arg
>WENV183749510
PPFU01177904
255845
Bacteroidota
>WENV183749866
PPFU01223920
235746
Bacteroidota
GAA
Phe
>WENV183749189
PPFU01133210
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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