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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183765264
PPYE01337178
81880
Gammaproteobacteria
GAG
Leu
>WENV183768943
PPYE01411968
81880
Gammaproteobacteria
GAG
Leu
>WENV183768937
PPYE01411962
30640
Gammaproteobacteria
GGA
Ser
>WENV183769017
PPYE01412207
3276
Gammaproteobacteria
>WENV183763955
PPYE01311320
238447
Gammaproteobacteria
TGT
Thr
>WENV183764022
PPYE01311934
53888
Gammaproteobacteria
GGA
Ser
>WENV183770805
PPYE01446732
53888
Gammaproteobacteria
GGA
Ser
>WENV183757191
PPYE01154405
397091
Gammaproteobacteria
TTG
Gln
>WENV183768930
PPYE01411954
397091
Gammaproteobacteria
TTG
Gln
>WENV183768950
PPYE01411980
397091
Gammaproteobacteria
TTG
Gln
>WENV183763956
PPYE01311323
147100
Gammaproteobacteria
TCT
Arg
>WENV183770187
PPYE01432946
147100
Gammaproteobacteria
TCT
Arg
>WENV183769730
PPYE01426533
188039
Gammaproteobacteria
CAT
Met
>WENV183760540
PPYE01233284
315638
Gammaproteobacteria
TAC
Val
>WENV183764174
PPYE01318217
195524
Gammaproteobacteria
TCT
Arg
>WENV183764065
PPYE01313158
144828
Gammaproteobacteria
TCT
Arg
>WENV183766229
PPYE01348124
144828
Gammaproteobacteria
TCT
Arg
>WENV183764136
PPYE01316160
3243
Gammaproteobacteria
>WENV183751290
PPYE01007414
173221
Gammaproteobacteria
CAT
Met
>WENV183752464
PPYE01046147
199276
Gammaproteobacteria
TCT
Arg
>WENV183763996
PPYE01311643
199276
Gammaproteobacteria
TCT
Arg
>WENV183768961
PPYE01411988
268376
Gammaproteobacteria
CTT
Lys
>WENV183751481
PPYE01015378
340369
Gammaproteobacteria
TCC
Gly
>WENV183768927
PPYE01411950
90409
Gammaproteobacteria
CAA
Leu
>WENV183760658
PPYE01234314
173636
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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