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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183775981
PPYF01076041
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183779192
PPYF01130475
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183782890
PPYF01220400
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183784699
PPYF01267366
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183787063
PPYF01311702
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183787138
PPYF01313796
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183787716
PPYF01348101
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183788273
PPYF01354577
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183789017
PPYF01372971
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183790120
PPYF01400929
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183791631
PPYF01437905
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183792929
PPYF01465751
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183786850
PPYF01307935
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183786941
PPYF01309105
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183787368
PPYF01322350
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183788926
PPYF01371327
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183775796
PPYF01071405
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183788919
PPYF01371181
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183775894
PPYF01073506
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183779455
PPYF01134932
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183782848
PPYF01220231
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183784764
PPYF01267556
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183786975
PPYF01309611
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183787296
PPYF01320053
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183788497
PPYF01366582
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183788998
PPYF01372555
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183790046
PPYF01395895
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183791574
PPYF01437698
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183775628
PPYF01068056
248694
Thermodesulfobacteriota
CAT
Met
>WENV183786883
PPYF01308491
248694
Thermodesulfobacteriota
CAT
Met
>WENV183788824
PPYF01370623
248694
Thermodesulfobacteriota
CAT
Met
>WENV183775865
PPYF01072735
248819
Thermodesulfobacteriota
CGC
Ala
>WENV183788710
PPYF01370303
248819
Thermodesulfobacteriota
CGC
Ala
>WENV183786955
PPYF01309199
345151
Thermodesulfobacteriota
CCC
Gly
>WENV183788911
PPYF01371078
345151
Thermodesulfobacteriota
CCC
Gly
>WENV183775918
PPYF01074156
246751
Thermodesulfobacteriota
CAC
Val
>WENV183788899
PPYF01371007
246751
Thermodesulfobacteriota
CAC
Val
>WENV183775899
PPYF01073685
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183787427
PPYF01325540
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183789012
PPYF01372853
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183779782
PPYF01152388
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183782680
PPYF01219556
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183784636
PPYF01267227
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183790119
PPYF01400742
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183791632
PPYF01437907
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183783455
PPYF01229638
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183785039
PPYF01268831
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183787268
PPYF01318811
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183788367
PPYF01358492
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183789941
PPYF01391561
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183792057
PPYF01448101
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183792832
PPYF01463700
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183775797
PPYF01071405
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183779755
PPYF01150973
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183786502
PPYF01304734
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183787241
PPYF01317454
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183788920
PPYF01371181
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183789142
PPYF01384461
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183775695
PPYF01069129
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183787097
PPYF01312381
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183787098
PPYF01312381
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183788906
PPYF01371059
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183775524
PPYF01066691
3406
Thermodesulfobacteriota
GCT
Ser
>WENV183779665
PPYF01144394
3406
Thermodesulfobacteriota
GCT
Ser
>WENV183786967
PPYF01309542
3406
Thermodesulfobacteriota
GCT
Ser
>WENV183788892
PPYF01370967
3406
Thermodesulfobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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