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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183807153
PVBE011174996
259184
Actinomycetota
GTG
His
>WENV183794558
PVBE010106374
241627
Actinomycetota
>WENV183797685
PVBE010355085
240960
Actinomycetota
TTC
Glu
>WENV183803907
PVBE010883986
240960
Actinomycetota
TTC
Glu
>WENV183804312
PVBE010918174
240687
Actinomycetota
>WENV183808986
PVBE011345995
240687
Actinomycetota
>WENV183811586
PVBE011595874
240687
Actinomycetota
>WENV183794431
PVBE010097554
236214
Actinomycetota
CCA
Trp
>WENV183795460
PVBE010172117
236214
Actinomycetota
CCA
Trp
>WENV183796093
PVBE010223330
236214
Actinomycetota
CCA
Trp
>WENV183799574
PVBE010519639
236214
Actinomycetota
CCA
Trp
>WENV183800741
PVBE010613038
236214
Actinomycetota
CCA
Trp
>WENV183809724
PVBE011413148
236214
Actinomycetota
CCA
Trp
>WENV183809853
PVBE011424745
236214
Actinomycetota
CCA
Trp
>WENV183811008
PVBE011537257
236214
Actinomycetota
CCA
Trp
>WENV183802305
PVBE010747101
152041
Actinomycetota
CAT
Met
>WENV183809988
PVBE011438869
147842
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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