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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1007085
SRR020488.327214
152301
Gammaproteobacteria
GAT
Ile
>SRA1006541
SRR020488.127701
147053
Gammaproteobacteria
GTT
Asn
>SRA1007128
SRR020488.345391
145713
Gammaproteobacteria
CAT
Met
>SRA1006658
SRR020488.169432
247088
Gammaproteobacteria
CCA
Trp
>SRA1006733
SRR020488.190280
247088
Gammaproteobacteria
CCA
Trp
>SRA1007147
SRR020488.353377
247088
Gammaproteobacteria
CCA
Trp
>SRA1006903
SRR020488.257654
97031
Gammaproteobacteria
TAG
Leu
>SRA1006483
SRR020488.104249
238510
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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