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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1007603
SRR020489.128270
96363
Cyanobacteriota
TAG
Leu
>SRA1007470
SRR020489.12311
252089
Cyanobacteriota
GTG
His
>SRA1007503
SRR020489.41209
252089
Cyanobacteriota
GTG
His
>SRA1007507
SRR020489.44156
252089
Cyanobacteriota
GTG
His
>SRA1007636
SRR020489.161650
252089
Cyanobacteriota
GTG
His
>SRA1007640
SRR020489.164688
252089
Cyanobacteriota
GTG
His
>SRA1007668
SRR020489.188076
252089
Cyanobacteriota
GTG
His
>SRA1007635
SRR020489.161120
144929
Cyanobacteriota
CAT
Met
>SRA1007638
SRR020489.162320
11030
Cyanobacteriota
GCT
Ser
>SRA1007673
SRR020489.192529
11030
Cyanobacteriota
GCT
Ser
>SRA1007495
SRR020489.36297
149253
Cyanobacteriota
ACG
Arg
>SRA1007559
SRR020489.89069
149253
Cyanobacteriota
ACG
Arg
>SRA1007606
SRR020489.129361
149253
Cyanobacteriota
ACG
Arg
>SRA1007513
SRR020489.46930
341034
Cyanobacteriota
GGT
Thr
>SRA1007588
SRR020489.112792
341034
Cyanobacteriota
GGT
Thr
>SRA1007617
SRR020489.137927
341034
Cyanobacteriota
GGT
Thr
>SRA1007486
SRR020489.28106
145761
Cyanobacteriota
GTC
Asp
>SRA1007530
SRR020489.63129
145761
Cyanobacteriota
GTC
Asp
>SRA1007532
SRR020489.65249
145761
Cyanobacteriota
GTC
Asp
>SRA1007545
SRR020489.79633
145761
Cyanobacteriota
GTC
Asp
>SRA1007564
SRR020489.93656
145761
Cyanobacteriota
GTC
Asp
>SRA1007540
SRR020489.74484
411836
Cyanobacteriota
TCC
Gly
>SRA1007577
SRR020489.107451
411836
Cyanobacteriota
TCC
Gly
>SRA1007569
SRR020489.97645
164907
Cyanobacteriota
GGG
Pro
>SRA1007581
SRR020489.108107
164907
Cyanobacteriota
GGG
Pro
>SRA1007509
SRR020489.45470
25356
Cyanobacteriota
GGA
Ser
>SRA1007560
SRR020489.89641
240100
Cyanobacteriota
CAT
Met
>SRA1007607
SRR020489.129427
240100
Cyanobacteriota
CAT
Met
>SRA1007508
SRR020489.45439
145893
Cyanobacteriota
CAT
Met
>SRA1007643
SRR020489.168390
145893
Cyanobacteriota
CAT
Met
>SRA1007539
SRR020489.74413
23971
Cyanobacteriota
TGA
Ser
>SRA1007667
SRR020489.186395
23971
Cyanobacteriota
TGA
Ser
>SRA1007474
SRR020489.19436
338782
Cyanobacteriota
GTT
Asn
>SRA1007494
SRR020489.35212
338782
Cyanobacteriota
GTT
Asn
>SRA1007565
SRR020489.93922
338782
Cyanobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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