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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005214
AMCI01000441
398829
Bacteroidota
CCT
Arg
>WENV170005178
AMCI01000002
175838
Bacteroidota
GTT
Asn
>WENV170005179
AMCI01000002
175838
Bacteroidota
GTT
Asn
>WENV170005180
AMCI01000002
175838
Bacteroidota
GTT
Asn
>WENV170005636
AMCI01009344
175838
Bacteroidota
GTT
Asn
>WENV170005637
AMCI01009344
175838
Bacteroidota
GTT
Asn
>WENV170005290
AMCI01001438
280557
Bacteroidota
CAT
Met
>WENV170005505
AMCI01006134
280557
Bacteroidota
CAT
Met
>WENV170005260
AMCI01001139
20492
Bacteroidota
GGA
Ser
>WENV170005300
AMCI01001770
20206
Bacteroidota
GGA
Ser
>WENV170005431
AMCI01004226
56493
Bacteroidota
TGA
Ser
>WENV170005213
AMCI01000429
56493
Bacteroidota
TGA
Ser
>WENV170005198
AMCI01000263
175903
Bacteroidota
GTG
His
>WENV170005478
AMCI01005496
29791
Bacteroidota
GCT
Ser
>WENV170005366
AMCI01003327
57645
Bacteroidota
TGA
Ser
>WENV170005473
AMCI01005311
56072
Bacteroidota
TAA
Leu
>WENV170005197
AMCI01000241
56072
Bacteroidota
TAA
Leu
>WENV170005173
AMCI01000002
56072
Bacteroidota
TAA
Leu
>WENV170005208
AMCI01000391
57807
Bacteroidota
TGA
Ser
>WENV170005294
AMCI01001559
57807
Bacteroidota
TGA
Ser
>WENV170005315
AMCI01002012
57807
Bacteroidota
TGA
Ser
>WENV170005356
AMCI01003098
57807
Bacteroidota
TGA
Ser
>WENV170005567
AMCI01007728
57807
Bacteroidota
TGA
Ser
>WENV170005284
AMCI01001361
175902
Bacteroidota
GGC
Ala
>WENV170005627
AMCI01008941
20533
Bacteroidota
GGA
Ser
>WENV170005629
AMCI01009063
189252
Bacteroidota
GGC
Ala
>WENV170005466
AMCI01005010
280478
Bacteroidota
GCC
Gly
>WENV170005341
AMCI01002675
187400
Bacteroidota
GTT
Asn
>WENV170005298
AMCI01001703
187400
Bacteroidota
GTT
Asn
>WENV170005297
AMCI01001703
187400
Bacteroidota
GTT
Asn
>WENV170005458
AMCI01004843
480318
Bacteroidota
CTG
Gln
>WENV170005560
AMCI01007653
158068
Bacteroidota
GGG
Pro
>WENV170005509
AMCI01006242
158068
Bacteroidota
GGG
Pro
>WENV170005324
AMCI01002223
158068
Bacteroidota
GGG
Pro
>WENV170005238
AMCI01000663
158068
Bacteroidota
GGG
Pro
>WENV170005462
AMCI01004876
118220
Bacteroidota
GTA
Tyr
>WENV170005195
AMCI01000219
398828
Bacteroidota
CCG
Arg
>WENV170005467
AMCI01005010
74084
Bacteroidota
CAG
Leu
>WENV170005517
AMCI01006457
280446
Bacteroidota
TTT
Lys
>WENV170005476
AMCI01005407
280446
Bacteroidota
TTT
Lys
>WENV170005471
AMCI01005083
280446
Bacteroidota
TTT
Lys
>WENV170005386
AMCI01003610
280446
Bacteroidota
TTT
Lys
>WENV170005367
AMCI01003359
280446
Bacteroidota
TTT
Lys
>WENV170005575
AMCI01007917
285750
Bacteroidota
CCC
Gly
>WENV170005416
AMCI01003995
398836
Bacteroidota
GCA
Cys
>WENV170005365
AMCI01003317
398836
Bacteroidota
GCA
Cys
>WENV170005523
AMCI01006680
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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