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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083969
BAAY01022736
99852
Bacillota
GTA
Tyr
>WENV084041
BAAY01029504
99852
Bacillota
GTA
Tyr
>WENV083909
BAAY01016306
280500
Bacillota
TGC
Ala
>WENV083565
BAAY01000133
280428
Bacillota
GAA
Phe
>WENV083738
BAAY01004893
280428
Bacillota
GAA
Phe
>WENV084022
BAAY01028777
280428
Bacillota
GAA
Phe
>WENV083740
BAAY01004893
280466
Bacillota
TAC
Val
>WENV084024
BAAY01028777
280466
Bacillota
TAC
Val
>WENV083863
BAAY01012454
280492
Bacillota
CTT
Lys
>WENV084030
BAAY01028937
175842
Bacillota
CAC
Val
>WENV083989
BAAY01025788
175842
Bacillota
CAC
Val
>WENV083853
BAAY01011719
175842
Bacillota
CAC
Val
>WENV083690
BAAY01003476
175842
Bacillota
CAC
Val
>WENV083936
BAAY01019663
280447
Bacillota
GAC
Val
>WENV083828
BAAY01010484
280447
Bacillota
GAC
Val
>WENV083799
BAAY01008146
280447
Bacillota
GAC
Val
>WENV083762
BAAY01006320
280447
Bacillota
GAC
Val
>WENV083654
BAAY01001866
280447
Bacillota
GAC
Val
>WENV083729
BAAY01004406
5692
Bacillota
GCT
Ser
>WENV083900
BAAY01014637
175825
Bacillota
GAT
Ile
>WENV083812
BAAY01009296
175825
Bacillota
GAT
Ile
>WENV083745
BAAY01005089
175825
Bacillota
GAT
Ile
>WENV083707
BAAY01004170
175825
Bacillota
GAT
Ile
>WENV083675
BAAY01002607
175825
Bacillota
GAT
Ile
>WENV083640
BAAY01001326
175825
Bacillota
GAT
Ile
>WENV083579
BAAY01000260
175825
Bacillota
GAT
Ile
>WENV083563
BAAY01000133
280427
Bacillota
TAC
Val
>WENV083714
BAAY01004270
280427
Bacillota
TAC
Val
>WENV083673
BAAY01002400
73009
Bacillota
CAG
Leu
>WENV083892
BAAY01013854
175859
Bacillota
TCT
Arg
>WENV083782
BAAY01007216
175859
Bacillota
TCT
Arg
>WENV083664
BAAY01002124
398835
Bacillota
GCC
Gly
>WENV083899
BAAY01014637
280436
Bacillota
TGC
Ala
>WENV083813
BAAY01009296
280436
Bacillota
TGC
Ala
>WENV083708
BAAY01004170
280436
Bacillota
TGC
Ala
>WENV083676
BAAY01002607
280436
Bacillota
TGC
Ala
>WENV083641
BAAY01001326
280436
Bacillota
TGC
Ala
>WENV083578
BAAY01000260
280436
Bacillota
TGC
Ala
>WENV083721
BAAY01004381
175847
Bacillota
GTC
Asp
>WENV083698
BAAY01003831
175831
Bacillota
ACG
Arg
>WENV083618
BAAY01000872
175831
Bacillota
ACG
Arg
>WENV083815
BAAY01009487
480322
Bacillota
CTG
Gln
>WENV083826
BAAY01010349
175868
Bacillota
GTT
Asn
>WENV083986
BAAY01025677
398854
Bacillota
CTC
Glu
>WENV083849
BAAY01011470
398854
Bacillota
CTC
Glu
>WENV083858
BAAY01012063
480324
Bacillota
TTG
Gln
>WENV083904
BAAY01015728
56079
Bacillota
AAG
Leu
>WENV083923
BAAY01017596
398857
Bacillota
TTC
Glu
>WENV083908
BAAY01016293
117745
Bacillota
GTA
Tyr
>WENV083724
BAAY01004381
117745
Bacillota
GTA
Tyr
>WENV083630
BAAY01001157
280444
Bacillota
GGT
Thr
>WENV084010
BAAY01027365
280444
Bacillota
GGT
Thr
>WENV084027
BAAY01028809
280444
Bacillota
GGT
Thr
>WENV083647
BAAY01001479
46643
Bacillota
TGA
Ser
>WENV083994
BAAY01026697
398832
Bacillota
TTC
Glu
>WENV083880
BAAY01013011
398832
Bacillota
TTC
Glu
>WENV083662
BAAY01001964
398832
Bacillota
TTC
Glu
>WENV083644
BAAY01001432
398832
Bacillota
TTC
Glu
>WENV083562
BAAY01000118
280561
Bacillota
CAT
Met
>WENV083693
BAAY01003518
280561
Bacillota
CAT
Met
>WENV083774
BAAY01006482
280476
Bacillota
TTT
Lys
>WENV083726
BAAY01004381
280462
Bacillota
GAA
Phe
>WENV083837
BAAY01011007
398852
Bacillota
CTC
Glu
>WENV083802
BAAY01008517
280483
Bacillota
GAA
Phe
>WENV083772
BAAY01006482
175857
Bacillota
GTG
His
>WENV083657
BAAY01001904
398833
Bacillota
TGT
Thr
>WENV084028
BAAY01028809
175849
Bacillota
GTC
Asp
>WENV083739
BAAY01004893
175849
Bacillota
GTC
Asp
>WENV083727
BAAY01004381
280463
Bacillota
TTT
Lys
>WENV083810
BAAY01009175
280486
Bacillota
TGC
Ala
>WENV083728
BAAY01004406
56074
Bacillota
TGA
Ser
>WENV083852
BAAY01011688
280473
Bacillota
TGG
Pro
>WENV083754
BAAY01005350
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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