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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086331
BABF01000544
29393
Actinobacteria
GCT
Ser
>WENV086353
BABF01000820
99865
Actinobacteria
CAG
Leu
>WENV086387
BABF01001568
21508
Actinobacteria
GAG
Leu
>WENV086389
BABF01001647
59689
Actinobacteria
GGA
Ser
>WENV086393
BABF01001685
280496
Actinobacteria
CGT
Thr
>WENV086394
BABF01001832
280450
Actinobacteria
TTT
Lys
>WENV086403
BABF01002253
150272
Actinobacteria
TAA
Leu
>WENV086411
BABF01002400
317680
Actinobacteria
CCG
Arg
>WENV086418
BABF01002972
175843
Actinobacteria
CAA
Leu
>WENV086423
BABF01003010
280549
Actinobacteria
CAC
Val
>WENV086424
BABF01003010
418252
Actinobacteria
GAC
Val
>WENV086426
BABF01003052
175907
Actinobacteria
TAC
Val
>WENV086429
BABF01003241
117777
Actinobacteria
>WENV086428
BABF01003241
175949
Actinobacteria
CAT
Met
>WENV086438
BABF01003917
175837
Actinobacteria
ACG
Arg
>WENV086439
BABF01003917
175837
Actinobacteria
ACG
Arg
>WENV086442
BABF01004144
176078
Actinobacteria
GGG
Pro
>WENV086445
BABF01004177
191955
Actinobacteria
TGT
Thr
>WENV086460
BABF01005188
480376
Actinobacteria
CCC
Gly
>WENV086464
BABF01005949
184065
Actinobacteria
TGG
Pro
>WENV086465
BABF01006128
398853
Actinobacteria
CTG
Gln
>WENV086466
BABF01006128
289788
Actinobacteria
CTC
Glu
>WENV086467
BABF01006322
317680
Actinobacteria
CCG
Arg
>WENV086469
BABF01006842
398948
Actinobacteria
TTC
Glu
>WENV086484
BABF01008537
481233
Actinobacteria
CCC
Gly
>WENV086485
BABF01008774
176077
Actinobacteria
CAT
Met
>WENV086488
BABF01009305
280703
Actinobacteria
CCT
Arg
>WENV086490
BABF01010041
176077
Actinobacteria
CAT
Met
>WENV086491
BABF01010923
280702
Actinobacteria
GGC
Ala
>WENV086498
BABF01011886
280498
Actinobacteria
GTT
Asn
>WENV086516
BABF01012371
398948
Actinobacteria
TTC
Glu
>WENV086517
BABF01012372
398948
Actinobacteria
TTC
Glu
>WENV086523
BABF01013257
280549
Actinobacteria
CAC
Val
>WENV086522
BABF01013257
418252
Actinobacteria
GAC
Val
>WENV086531
BABF01014144
29393
Actinobacteria
GCT
Ser
>WENV086536
BABF01014878
482604
Actinobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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