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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086509
BABF01012286
20221
Firmicutes
>WENV086357
BABF01000961
141202
Firmicutes
CAA
Leu
>WENV086374
BABF01001271
184495
Firmicutes
CAT
Met
>WENV086318
BABF01000428
289717
Firmicutes
CTT
Lys
>WENV086454
BABF01004820
281303
Firmicutes
CTT
Lys
>WENV086361
BABF01001014
408526
Firmicutes
GCA
Cys
>WENV086362
BABF01001014
405393
Firmicutes
GCC
Gly
>WENV086307
BABF01000294
20932
Firmicutes
GCT
Ser
>WENV086375
BABF01001271
296855
Firmicutes
GGT
Thr
>WENV086505
BABF01012285
124757
Firmicutes
GTA
Tyr
>WENV086515
BABF01012286
124757
Firmicutes
GTA
Tyr
>WENV086503
BABF01012285
195133
Firmicutes
GTC
Asp
>WENV086310
BABF01000321
280547
Firmicutes
GTC
Asp
>WENV086502
BABF01012285
280708
Firmicutes
TAC
Val
>WENV086323
BABF01000435
289715
Firmicutes
TAC
Val
>WENV086329
BABF01000518
289715
Firmicutes
TAC
Val
>WENV086274
BABF01000023
119459
Firmicutes
TAG
Leu
>WENV086506
BABF01012285
486506
Firmicutes
TCC
Gly
>WENV086514
BABF01012286
486506
Firmicutes
TCC
Gly
>WENV086306
BABF01000294
48505
Firmicutes
TGA
Ser
>WENV086275
BABF01000024
295166
Firmicutes
TGC
Ala
>WENV086448
BABF01004305
295166
Firmicutes
TGC
Ala
>WENV086336
BABF01000582
280486
Firmicutes
TGC
Ala
>WENV086370
BABF01001177
280486
Firmicutes
TGC
Ala
>WENV086427
BABF01003197
280486
Firmicutes
TGC
Ala
>WENV086479
BABF01007795
280486
Firmicutes
TGC
Ala
>WENV086378
BABF01001271
289713
Firmicutes
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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