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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170045766
CDYY01006645
280500
Bacillota
TGC
Ala
>WENV170045954
CDYY01015181
405363
Bacillota
GCA
Cys
>WENV170046530
CDYY01040710
280428
Bacillota
GAA
Phe
>WENV170046354
CDYY01033399
179917
Bacillota
CAT
Met
>WENV170046352
CDYY01033344
302388
Bacillota
TGC
Ala
>WENV170046814
CDYY01053653
175842
Bacillota
CAC
Val
>WENV170046734
CDYY01048506
175842
Bacillota
CAC
Val
>WENV170046665
CDYY01045737
175842
Bacillota
CAC
Val
>WENV170046497
CDYY01039241
175842
Bacillota
CAC
Val
>WENV170046353
CDYY01033344
194260
Bacillota
GAT
Ile
>WENV170046727
CDYY01048451
179176
Bacillota
ACG
Arg
>WENV170045970
CDYY01015971
295166
Bacillota
TGC
Ala
>WENV170045737
CDYY01005410
280447
Bacillota
GAC
Val
>WENV170046256
CDYY01028695
5692
Bacillota
GCT
Ser
>WENV170045849
CDYY01009619
5692
Bacillota
GCT
Ser
>WENV170046253
CDYY01028662
175825
Bacillota
GAT
Ile
>WENV170045827
CDYY01008617
73009
Bacillota
CAG
Leu
>WENV170045796
CDYY01007553
291581
Bacillota
CGG
Pro
>WENV170046075
CDYY01020152
175859
Bacillota
TCT
Arg
>WENV170046252
CDYY01028662
280436
Bacillota
TGC
Ala
>WENV170045846
CDYY01009581
280436
Bacillota
TGC
Ala
>WENV170045685
CDYY01003377
290325
Bacillota
GCC
Gly
>WENV170046368
CDYY01033778
284627
Bacillota
GAA
Phe
>WENV170046218
CDYY01027350
284627
Bacillota
GAA
Phe
>WENV170045799
CDYY01007603
295350
Bacillota
TGC
Ala
>WENV170046655
CDYY01045400
480322
Bacillota
CTG
Gln
>WENV170045795
CDYY01007553
480322
Bacillota
CTG
Gln
>WENV170046762
CDYY01050846
175868
Bacillota
GTT
Asn
>WENV170046743
CDYY01049566
175868
Bacillota
GTT
Asn
>WENV170046596
CDYY01043542
175868
Bacillota
GTT
Asn
>WENV170046438
CDYY01036210
322848
Bacillota
CTT
Lys
>WENV170045896
CDYY01011601
398854
Bacillota
CTC
Glu
>WENV170046286
CDYY01029945
291576
Bacillota
CCC
Gly
>WENV170046296
CDYY01031018
480324
Bacillota
TTG
Gln
>WENV170046089
CDYY01020868
480324
Bacillota
TTG
Gln
>WENV170045953
CDYY01015181
480324
Bacillota
TTG
Gln
>WENV170046157
CDYY01023620
303718
Bacillota
TGT
Thr
>WENV170045725
CDYY01004983
398857
Bacillota
TTC
Glu
>WENV170046160
CDYY01023674
280444
Bacillota
GGT
Thr
>WENV170046062
CDYY01019255
280444
Bacillota
GGT
Thr
>WENV170046051
CDYY01018960
321753
Bacillota
GCC
Gly
>WENV170046156
CDYY01023568
179755
Bacillota
CCG
Arg
>WENV170046308
CDYY01031555
398832
Bacillota
TTC
Glu
>WENV170046498
CDYY01039365
398852
Bacillota
CTC
Glu
>WENV170046341
CDYY01032950
321248
Bacillota
TAC
Val
>WENV170046124
CDYY01022768
321248
Bacillota
TAC
Val
>WENV170045770
CDYY01006708
175857
Bacillota
GTG
His
>WENV170046159
CDYY01023674
175849
Bacillota
GTC
Asp
>WENV170046612
CDYY01044031
280486
Bacillota
TGC
Ala
>WENV170045848
CDYY01009619
56074
Bacillota
TGA
Ser
>WENV170046008
CDYY01017272
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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