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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170047611
CDYZ01043732
280500
Bacillota
TGC
Ala
>WENV170046989
CDYZ01007974
179563
Bacillota
GAT
Ile
>WENV170046862
CDYZ01001875
73664
Bacillota
CAG
Leu
>WENV170046901
CDYZ01004967
73664
Bacillota
CAG
Leu
>WENV170047573
CDYZ01041035
73664
Bacillota
CAG
Leu
>WENV170047954
CDYZ01063467
481217
Bacillota
GCA
Cys
>WENV170046988
CDYZ01007974
353153
Bacillota
TGC
Ala
>WENV170048032
CDYZ01066970
455259
Bacillota
TTC
Glu
>WENV170047283
CDYZ01023700
284627
Bacillota
GAA
Phe
>WENV170047936
CDYZ01062827
303718
Bacillota
TGT
Thr
>WENV170047633
CDYZ01045531
303718
Bacillota
TGT
Thr
>WENV170047457
CDYZ01033999
303718
Bacillota
TGT
Thr
>WENV170046908
CDYZ01005289
303718
Bacillota
TGT
Thr
>WENV170047471
CDYZ01034782
56079
Bacillota
AAG
Leu
>WENV170046970
CDYZ01006930
56079
Bacillota
AAG
Leu
>WENV170047666
CDYZ01047149
186051
Bacillota
GAT
Ile
>WENV170047895
CDYZ01061135
117745
Bacillota
GTA
Tyr
>WENV170046927
CDYZ01005893
317482
Bacillota
TAC
Val
>WENV170047624
CDYZ01045527
342104
Bacillota
TAC
Val
>WENV170047761
CDYZ01054107
321753
Bacillota
GCC
Gly
>WENV170047126
CDYZ01015214
118669
Bacillota
GTA
Tyr
>WENV170047336
CDYZ01027695
175857
Bacillota
GTG
His
>WENV170047338
CDYZ01027695
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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