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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170057740
CDZG01048919
295385
Bacteroidota
CCA
Trp
>WENV170057531
CDZG01041129
117741
Bacteroidota
TAG
Leu
>WENV170056671
CDZG01010587
175838
Bacteroidota
GTT
Asn
>WENV170056538
CDZG01006432
175904
Bacteroidota
CGG
Pro
>WENV170058015
CDZG01059956
400161
Bacteroidota
GGT
Thr
>WENV170057690
CDZG01046738
289031
Bacteroidota
CAT
Met
>WENV170057156
CDZG01027657
289031
Bacteroidota
CAT
Met
>WENV170057053
CDZG01024593
289031
Bacteroidota
CAT
Met
>WENV170057786
CDZG01051071
156422
Bacteroidota
TAC
Val
>WENV170057193
CDZG01028705
280557
Bacteroidota
CAT
Met
>WENV170057856
CDZG01054181
20206
Bacteroidota
GGA
Ser
>WENV170056912
CDZG01019369
483416
Bacteroidota
CTG
Gln
>WENV170056744
CDZG01014159
483416
Bacteroidota
CTG
Gln
>WENV170058077
CDZG01062817
201819
Bacteroidota
CAT
Met
>WENV170058076
CDZG01062817
201819
Bacteroidota
CAT
Met
>WENV170057074
CDZG01025632
118221
Bacteroidota
CAA
Leu
>WENV170056690
CDZG01011624
56493
Bacteroidota
TGA
Ser
>WENV170057997
CDZG01059893
175903
Bacteroidota
GTG
His
>WENV170057981
CDZG01059007
175903
Bacteroidota
GTG
His
>WENV170057626
CDZG01044622
175903
Bacteroidota
GTG
His
>WENV170056483
CDZG01002956
118089
Bacteroidota
TAG
Leu
>WENV170057719
CDZG01048220
203954
Bacteroidota
GTC
Asp
>WENV170057842
CDZG01053647
178907
Bacteroidota
TCT
Arg
>WENV170056488
CDZG01003955
405877
Bacteroidota
GGT
Thr
>WENV170057546
CDZG01041532
56385
Bacteroidota
TGA
Ser
>WENV170056589
CDZG01007560
56385
Bacteroidota
TGA
Ser
>WENV170058016
CDZG01059956
312035
Bacteroidota
CCA
Trp
>WENV170058104
CDZG01063280
178133
Bacteroidota
GAT
Ile
>WENV170058141
CDZG01064474
21127
Bacteroidota
GGA
Ser
>WENV170056877
CDZG01018393
21127
Bacteroidota
GGA
Ser
>WENV170058133
CDZG01063903
57807
Bacteroidota
TGA
Ser
>WENV170057865
CDZG01054188
57807
Bacteroidota
TGA
Ser
>WENV170056485
CDZG01003514
57807
Bacteroidota
TGA
Ser
>WENV170057802
CDZG01051914
280451
Bacteroidota
CGT
Thr
>WENV170057448
CDZG01038941
418894
Bacteroidota
TTC
Glu
>WENV170057400
CDZG01037387
99847
Bacteroidota
GTA
Tyr
>WENV170056474
CDZG01002472
404109
Bacteroidota
CTC
Glu
>WENV170056473
CDZG01002472
404109
Bacteroidota
CTC
Glu
>WENV170056472
CDZG01002472
404109
Bacteroidota
CTC
Glu
>WENV170056471
CDZG01002472
404109
Bacteroidota
CTC
Glu
>WENV170056470
CDZG01002472
404109
Bacteroidota
CTC
Glu
>WENV170058144
CDZG01064476
186874
Bacteroidota
CAT
Met
>WENV170058062
CDZG01062279
186874
Bacteroidota
CAT
Met
>WENV170056944
CDZG01020894
186874
Bacteroidota
CAT
Met
>WENV170056749
CDZG01014180
46648
Bacteroidota
TAA
Leu
>WENV170057586
CDZG01043047
332896
Bacteroidota
TTT
Lys
>WENV170057197
CDZG01028780
332896
Bacteroidota
TTT
Lys
>WENV170056507
CDZG01004847
280478
Bacteroidota
GCC
Gly
>WENV170056689
CDZG01011602
107227
Bacteroidota
GTA
Tyr
>WENV170056826
CDZG01016313
107227
Bacteroidota
GTA
Tyr
>WENV170057323
CDZG01033845
187814
Bacteroidota
GTC
Asp
>WENV170057322
CDZG01033845
187814
Bacteroidota
GTC
Asp
>WENV170057321
CDZG01033845
187814
Bacteroidota
GTC
Asp
>WENV170057320
CDZG01033845
187814
Bacteroidota
GTC
Asp
>WENV170056726
CDZG01013208
183889
Bacteroidota
GGC
Ala
>WENV170056697
CDZG01012058
183889
Bacteroidota
GGC
Ala
>WENV170056422
CDZG01000878
398828
Bacteroidota
CCG
Arg
>WENV170058179
CDZG01065569
74084
Bacteroidota
CAG
Leu
>WENV170057429
CDZG01038414
74084
Bacteroidota
CAG
Leu
>WENV170056824
CDZG01016283
176192
Bacteroidota
TCT
Arg
>WENV170056751
CDZG01014180
481328
Bacteroidota
TTG
Gln
>WENV170057280
CDZG01032272
280446
Bacteroidota
TTT
Lys
>WENV170056571
CDZG01007477
484496
Bacteroidota
TTG
Gln
>WENV170056579
CDZG01007495
484496
Bacteroidota
TTG
Gln
>WENV170056815
CDZG01015747
398836
Bacteroidota
GCA
Cys
>WENV170057404
CDZG01037520
398836
Bacteroidota
GCA
Cys
>WENV170058033
CDZG01060857
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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