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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062145
CDZJ01003815
175842
Bacillota
CAC
Val
>WENV170062830
CDZJ01028393
175842
Bacillota
CAC
Val
>WENV170062575
CDZJ01020319
287289
Bacillota
GCC
Gly
>WENV170062633
CDZJ01021994
287289
Bacillota
GCC
Gly
>WENV170062795
CDZJ01027049
287289
Bacillota
GCC
Gly
>WENV170062836
CDZJ01028763
287289
Bacillota
GCC
Gly
>WENV170062339
CDZJ01009967
215243
Bacillota
CAT
Met
>WENV170062484
CDZJ01016279
215243
Bacillota
CAT
Met
>WENV170062540
CDZJ01018804
215243
Bacillota
CAT
Met
>WENV170062357
CDZJ01010824
280447
Bacillota
GAC
Val
>WENV170062485
CDZJ01016279
460732
Bacillota
TTC
Glu
>WENV170062168
CDZJ01004728
175831
Bacillota
ACG
Arg
>WENV170062272
CDZJ01007830
510876
Bacillota
GGT
Thr
>WENV170062720
CDZJ01024142
295350
Bacillota
TGC
Ala
>WENV170062192
CDZJ01005210
137739
Bacillota
TAG
Leu
>WENV170062864
CDZJ01029795
303718
Bacillota
TGT
Thr
>WENV170062576
CDZJ01020320
303718
Bacillota
TGT
Thr
>WENV170062144
CDZJ01003785
323864
Bacillota
TGC
Ala
>WENV170062793
CDZJ01027049
175911
Bacillota
GTC
Asp
>WENV170062787
CDZJ01026859
175911
Bacillota
GTC
Asp
>WENV170062631
CDZJ01021994
175911
Bacillota
GTC
Asp
>WENV170062471
CDZJ01015625
175911
Bacillota
GTC
Asp
>WENV170062418
CDZJ01013309
292374
Bacillota
TGC
Ala
>WENV170062926
CDZJ01031156
321753
Bacillota
GCC
Gly
>WENV170062324
CDZJ01009381
321753
Bacillota
GCC
Gly
>WENV170062925
CDZJ01031135
118669
Bacillota
GTA
Tyr
>WENV170062417
CDZJ01013309
201856
Bacillota
GAT
Ile
>WENV170062150
CDZJ01004006
201856
Bacillota
GAT
Ile
>WENV170062083
CDZJ01001734
201856
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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