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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068568
CDZP01012158
280500
Bacillota
TGC
Ala
>WENV170068645
CDZP01013762
349107
Bacillota
GCC
Gly
>WENV170068727
CDZP01017042
349107
Bacillota
GCC
Gly
>WENV170068730
CDZP01017042
349107
Bacillota
GCC
Gly
>WENV170068644
CDZP01013762
280428
Bacillota
GAA
Phe
>WENV170068729
CDZP01017042
280428
Bacillota
GAA
Phe
>WENV170068815
CDZP01020024
424998
Bacillota
GCC
Gly
>WENV170069569
CDZP01048864
229015
Bacillota
GTG
His
>WENV170068632
CDZP01013430
179917
Bacillota
CAT
Met
>WENV170069600
CDZP01049573
406553
Bacillota
TTG
Gln
>WENV170069185
CDZP01034108
406553
Bacillota
TTG
Gln
>WENV170068524
CDZP01009804
215243
Bacillota
CAT
Met
>WENV170069616
CDZP01050298
190476
Bacillota
CAT
Met
>WENV170068649
CDZP01014142
190476
Bacillota
CAT
Met
>WENV170068971
CDZP01026677
203929
Bacillota
TCT
Arg
>WENV170069026
CDZP01028618
175825
Bacillota
GAT
Ile
>WENV170069552
CDZP01048021
284723
Bacillota
TAC
Val
>WENV170069150
CDZP01033268
284723
Bacillota
TAC
Val
>WENV170068792
CDZP01019562
284723
Bacillota
TAC
Val
>WENV170068629
CDZP01013430
284723
Bacillota
TAC
Val
>WENV170069389
CDZP01040124
290325
Bacillota
GCC
Gly
>WENV170068746
CDZP01017486
290325
Bacillota
GCC
Gly
>WENV170069568
CDZP01048864
179810
Bacillota
TCT
Arg
>WENV170068255
CDZP01000330
295350
Bacillota
TGC
Ala
>WENV170068884
CDZP01023187
291576
Bacillota
CCC
Gly
>WENV170069540
CDZP01047422
480324
Bacillota
TTG
Gln
>WENV170068448
CDZP01007067
497729
Bacillota
CCA
Trp
>WENV170069379
CDZP01040103
303718
Bacillota
TGT
Thr
>WENV170069060
CDZP01030405
303718
Bacillota
TGT
Thr
>WENV170069000
CDZP01027260
303718
Bacillota
TGT
Thr
>WENV170069607
CDZP01050268
323864
Bacillota
TGC
Ala
>WENV170068293
CDZP01001581
323864
Bacillota
TGC
Ala
>WENV170069237
CDZP01036268
292374
Bacillota
TGC
Ala
>WENV170069576
CDZP01049187
186051
Bacillota
GAT
Ile
>WENV170069503
CDZP01044995
321753
Bacillota
GCC
Gly
>WENV170068978
CDZP01026841
321753
Bacillota
GCC
Gly
>WENV170069080
CDZP01031150
179755
Bacillota
CCG
Arg
>WENV170069617
CDZP01050298
398832
Bacillota
TTC
Glu
>WENV170068650
CDZP01014142
398832
Bacillota
TTC
Glu
>WENV170068791
CDZP01019562
175915
Bacillota
GTC
Asp
>WENV170068797
CDZP01019562
280476
Bacillota
TTT
Lys
>WENV170068270
CDZP01000335
280476
Bacillota
TTT
Lys
>WENV170069236
CDZP01036268
201856
Bacillota
GAT
Ile
>WENV170068267
CDZP01000335
179166
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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