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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170111327
CECJ01000210
140771
Bacteroidetes
>WENV170111330
CECJ01000210
140771
Bacteroidetes
>WENV170111334
CECJ01000417
398836
Bacteroidetes
GCA
Cys
>WENV170111344
CECJ01001155
20449
Bacteroidetes
GGA
Ser
>WENV170111362
CECJ01001866
289031
Bacteroidetes
CAT
Met
>WENV170111370
CECJ01002260
176192
Bacteroidetes
TCT
Arg
>WENV170111386
CECJ01002998
398872
Bacteroidetes
GGT
Thr
>WENV170111399
CECJ01003966
280557
Bacteroidetes
CAT
Met
>WENV170111406
CECJ01004331
57807
Bacteroidetes
TGA
Ser
>WENV170111417
CECJ01004527
484496
Bacteroidetes
TTG
Gln
>WENV170111422
CECJ01004876
398860
Bacteroidetes
CTC
Glu
>WENV170111439
CECJ01005520
20449
Bacteroidetes
GGA
Ser
>WENV170111464
CECJ01007009
176192
Bacteroidetes
TCT
Arg
>WENV170111469
CECJ01007574
289031
Bacteroidetes
CAT
Met
>WENV170111486
CECJ01007819
175844
Bacteroidetes
GGC
Ala
>WENV170111516
CECJ01008553
398836
Bacteroidetes
GCA
Cys
>WENV170111533
CECJ01009404
280532
Bacteroidetes
>WENV170111552
CECJ01009917
398871
Bacteroidetes
TTC
Glu
>WENV170111553
CECJ01009917
398871
Bacteroidetes
TTC
Glu
>WENV170111569
CECJ01010785
176192
Bacteroidetes
TCT
Arg
>WENV170111598
CECJ01011410
280557
Bacteroidetes
CAT
Met
>WENV170111604
CECJ01011608
398836
Bacteroidetes
GCA
Cys
>WENV170111605
CECJ01011616
398836
Bacteroidetes
GCA
Cys
>WENV170111608
CECJ01011802
201819
Bacteroidetes
CAT
Met
>WENV170111617
CECJ01012061
21127
Bacteroidetes
GGA
Ser
>WENV170111619
CECJ01012198
405877
Bacteroidetes
GGT
Thr
>WENV170111623
CECJ01012320
21127
Bacteroidetes
GGA
Ser
>WENV170111629
CECJ01012488
29791
Bacteroidetes
GCT
Ser
>WENV170111630
CECJ01012488
398860
Bacteroidetes
CTC
Glu
>WENV170111655
CECJ01013348
175906
Bacteroidetes
GTG
His
>WENV170111656
CECJ01013348
175906
Bacteroidetes
GTG
His
>WENV170111658
CECJ01013350
398828
Bacteroidetes
CCG
Arg
>WENV170111676
CECJ01013741
186874
Bacteroidetes
CAT
Met
>WENV170111680
CECJ01013969
483416
Bacteroidetes
CTG
Gln
>WENV170111710
CECJ01015430
20206
Bacteroidetes
GGA
Ser
>WENV170111711
CECJ01015444
399026
Bacteroidetes
CCT
Arg
>WENV170111712
CECJ01015448
178907
Bacteroidetes
TCT
Arg
>WENV170111718
CECJ01015678
117741
Bacteroidetes
TAG
Leu
>WENV170111737
CECJ01016872
201819
Bacteroidetes
CAT
Met
>WENV170111753
CECJ01017422
175903
Bacteroidetes
GTG
His
>WENV170111755
CECJ01017461
289031
Bacteroidetes
CAT
Met
>WENV170111761
CECJ01017873
176192
Bacteroidetes
TCT
Arg
>WENV170111772
CECJ01018301
74084
Bacteroidetes
CAG
Leu
>WENV170111786
CECJ01019070
480325
Bacteroidetes
CTG
Gln
>WENV170111787
CECJ01019070
480325
Bacteroidetes
CTG
Gln
>WENV170111788
CECJ01019070
480325
Bacteroidetes
CTG
Gln
>WENV170111798
CECJ01019545
20492
Bacteroidetes
GGA
Ser
>WENV170111799
CECJ01019697
29791
Bacteroidetes
GCT
Ser
>WENV170111800
CECJ01019697
398860
Bacteroidetes
CTC
Glu
>WENV170111806
CECJ01019821
99847
Bacteroidetes
GTA
Tyr
>WENV170111808
CECJ01020030
175902
Bacteroidetes
GGC
Ala
>WENV170111836
CECJ01020916
57807
Bacteroidetes
TGA
Ser
>WENV170111841
CECJ01021091
175936
Bacteroidetes
CAT
Met
>WENV170111847
CECJ01021441
322836
Bacteroidetes
CGT
Thr
>WENV170111851
CECJ01021682
117804
Bacteroidetes
TAG
Leu
>WENV170111867
CECJ01022361
57807
Bacteroidetes
TGA
Ser
>WENV170111871
CECJ01022610
99847
Bacteroidetes
GTA
Tyr
>WENV170111874
CECJ01022613
57807
Bacteroidetes
TGA
Ser
>WENV170111877
CECJ01022965
488746
Bacteroidetes
CTG
Gln
>WENV170111888
CECJ01023578
203954
Bacteroidetes
GTC
Asp
>WENV170111893
CECJ01023589
480404
Bacteroidetes
TTG
Gln
>WENV170111899
CECJ01023852
285750
Bacteroidetes
CCC
Gly
>WENV170111907
CECJ01024307
99847
Bacteroidetes
GTA
Tyr
>WENV170111914
CECJ01024483
405877
Bacteroidetes
GGT
Thr
>WENV170111932
CECJ01025245
280451
Bacteroidetes
CGT
Thr
>WENV170111944
CECJ01026053
99847
Bacteroidetes
GTA
Tyr
>WENV170111946
CECJ01026053
295385
Bacteroidetes
CCA
Trp
>WENV170111953
CECJ01026279
57807
Bacteroidetes
TGA
Ser
>WENV170111965
CECJ01026725
73011
Bacteroidetes
CAA
Leu
>WENV170111966
CECJ01026732
280553
Bacteroidetes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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