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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112815
CENF01010573
284706
Gammaproteobacteria
GTT
Asn
>WENV170114188
CENF01157731
158246
Gammaproteobacteria
GTC
Asp
>WENV170113868
CENF01117307
314350
Gammaproteobacteria
CCA
Trp
>WENV170114193
CENF01158259
176796
Gammaproteobacteria
GGG
Pro
>WENV170114637
CENF01209771
178025
Gammaproteobacteria
GAC
Val
>WENV170113761
CENF01103406
292006
Gammaproteobacteria
TGC
Ala
>WENV170113272
CENF01053633
302111
Gammaproteobacteria
GTT
Asn
>WENV170112974
CENF01024001
334421
Gammaproteobacteria
TGT
Thr
>WENV170112810
CENF01010085
488965
Gammaproteobacteria
GCA
Cys
>WENV170113760
CENF01103406
176301
Gammaproteobacteria
GAT
Ile
>WENV170112975
CENF01024003
198943
Gammaproteobacteria
CAT
Met
>WENV170112904
CENF01019669
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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