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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170116146
CENG01089163
424450
Alphaproteobacteria
GGT
Thr
>WENV170116672
CENG01196175
404592
Alphaproteobacteria
GGT
Thr
>WENV170115602
CENG01032923
140963
Alphaproteobacteria
>WENV170115433
CENG01020063
201940
Alphaproteobacteria
CAT
Met
>WENV170116283
CENG01105573
201940
Alphaproteobacteria
CAT
Met
>WENV170115337
CENG01013235
197241
Alphaproteobacteria
GGG
Pro
>WENV170115201
CENG01002345
290043
Alphaproteobacteria
TGC
Ala
>WENV170115470
CENG01022018
481268
Alphaproteobacteria
TCC
Gly
>WENV170115431
CENG01019710
481268
Alphaproteobacteria
TCC
Gly
>WENV170115463
CENG01021875
193088
Alphaproteobacteria
GAT
Ile
>WENV170116503
CENG01125958
314617
Alphaproteobacteria
TAC
Val
>WENV170115256
CENG01006394
281659
Alphaproteobacteria
TGC
Ala
>WENV170116279
CENG01105215
179941
Alphaproteobacteria
CAT
Met
>WENV170115916
CENG01062234
176153
Alphaproteobacteria
CAT
Met
>WENV170116151
CENG01089816
435083
Alphaproteobacteria
>WENV170115563
CENG01028613
435083
Alphaproteobacteria
>WENV170116406
CENG01119444
400544
Alphaproteobacteria
GGT
Thr
>WENV170115937
CENG01064444
281650
Alphaproteobacteria
CCA
Trp
>WENV170115262
CENG01006626
281650
Alphaproteobacteria
CCA
Trp
>WENV170115640
CENG01035838
212319
Alphaproteobacteria
GTG
His
>WENV170116001
CENG01073155
398994
Alphaproteobacteria
GTT
Asn
>WENV170115410
CENG01018006
195438
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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