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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170117491
CENJ01013584
158246
Gammaproteobacteria
GTC
Asp
>WENV170120483
CENJ01325105
123265
Gammaproteobacteria
GAG
Leu
>WENV170119065
CENJ01108822
183804
Gammaproteobacteria
CAT
Met
>WENV170117447
CENJ01012203
480941
Gammaproteobacteria
TCC
Gly
>WENV170119390
CENJ01138242
281275
Gammaproteobacteria
TGT
Thr
>WENV170118735
CENJ01086029
314350
Gammaproteobacteria
CCA
Trp
>WENV170117669
CENJ01022629
314350
Gammaproteobacteria
CCA
Trp
>WENV170118930
CENJ01099565
29834
Gammaproteobacteria
GCT
Ser
>WENV170118590
CENJ01076096
178025
Gammaproteobacteria
GAC
Val
>WENV170117661
CENJ01022257
74416
Gammaproteobacteria
TAA
Leu
>WENV170117500
CENJ01014199
282550
Gammaproteobacteria
TAC
Val
>WENV170119074
CENJ01109516
292006
Gammaproteobacteria
TGC
Ala
>WENV170118775
CENJ01088803
292006
Gammaproteobacteria
TGC
Ala
>WENV170120120
CENJ01184092
181513
Gammaproteobacteria
TGG
Pro
>WENV170119600
CENJ01153987
56694
Gammaproteobacteria
GGA
Ser
>WENV170118298
CENJ01057259
281668
Gammaproteobacteria
TTT
Lys
>WENV170119069
CENJ01109365
176545
Gammaproteobacteria
CAT
Met
>WENV170119763
CENJ01163219
307269
Gammaproteobacteria
TTC
Glu
>WENV170117965
CENJ01039443
208229
Gammaproteobacteria
TGG
Pro
>WENV170117660
CENJ01022257
481678
Gammaproteobacteria
GCA
Cys
>WENV170118401
CENJ01064447
319139
Gammaproteobacteria
GCC
Gly
>WENV170117659
CENJ01022257
319139
Gammaproteobacteria
GCC
Gly
>WENV170120071
CENJ01173744
488965
Gammaproteobacteria
GCA
Cys
>WENV170119439
CENJ01142185
488965
Gammaproteobacteria
GCA
Cys
>WENV170119143
CENJ01115973
488965
Gammaproteobacteria
GCA
Cys
>WENV170119116
CENJ01113180
488965
Gammaproteobacteria
GCA
Cys
>WENV170118002
CENJ01040805
488965
Gammaproteobacteria
GCA
Cys
>WENV170119073
CENJ01109516
176301
Gammaproteobacteria
GAT
Ile
>WENV170118774
CENJ01088803
176301
Gammaproteobacteria
GAT
Ile
>WENV170119421
CENJ01140936
180678
Gammaproteobacteria
CCG
Arg
>WENV170117593
CENJ01019061
490297
Gammaproteobacteria
GCA
Cys
>WENV170120012
CENJ01172883
201377
Gammaproteobacteria
TGG
Pro
>WENV170117771
CENJ01028776
480548
Gammaproteobacteria
GCA
Cys
>WENV170119399
CENJ01139279
282018
Gammaproteobacteria
TGT
Thr
>WENV170118291
CENJ01057122
282018
Gammaproteobacteria
TGT
Thr
>WENV170117869
CENJ01034453
281939
Gammaproteobacteria
TTT
Lys
>WENV170119755
CENJ01162983
186591
Gammaproteobacteria
ACG
Arg
>WENV170118812
CENJ01090894
282902
Gammaproteobacteria
TGT
Thr
>WENV170117276
CENJ01002634
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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