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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170142976
CENY01041321
158246
Gammaproteobacteria
GTC
Asp
>WENV170144756
CENY01168872
158246
Gammaproteobacteria
GTC
Asp
>WENV170143661
CENY01086567
123265
Gammaproteobacteria
GAG
Leu
>WENV170143886
CENY01106619
281275
Gammaproteobacteria
TGT
Thr
>WENV170143461
CENY01073429
328691
Gammaproteobacteria
GGT
Thr
>WENV170142450
CENY01009361
176554
Gammaproteobacteria
CAT
Met
>WENV170143889
CENY01106619
281276
Gammaproteobacteria
GGT
Thr
>WENV170144274
CENY01139687
292194
Gammaproteobacteria
GGT
Thr
>WENV170143888
CENY01106619
399250
Gammaproteobacteria
TCC
Gly
>WENV170142741
CENY01025724
292006
Gammaproteobacteria
TGC
Ala
>WENV170144348
CENY01145082
178168
Gammaproteobacteria
ACG
Arg
>WENV170143887
CENY01106619
140800
Gammaproteobacteria
GTA
Tyr
>WENV170144163
CENY01130309
306288
Gammaproteobacteria
GCC
Gly
>WENV170143299
CENY01062358
306288
Gammaproteobacteria
GCC
Gly
>WENV170142740
CENY01025724
176301
Gammaproteobacteria
GAT
Ile
>WENV170143120
CENY01049826
176301
Gammaproteobacteria
GAT
Ile
>WENV170145176
CENY01269820
180678
Gammaproteobacteria
CCG
Arg
>WENV170144152
CENY01129371
201377
Gammaproteobacteria
TGG
Pro
>WENV170143090
CENY01047963
178468
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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