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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170149204
CEOC01009201
319139
Gammaproteobacteria
GCC
Gly
>WENV170149220
CEOC01010615
292194
Gammaproteobacteria
GGT
Thr
>WENV170149248
CEOC01012836
13452
Gammaproteobacteria
GCT
Ser
>WENV170149253
CEOC01014049
282550
Gammaproteobacteria
TAC
Val
>WENV170149526
CEOC01034513
480941
Gammaproteobacteria
TCC
Gly
>WENV170150007
CEOC01074187
176301
Gammaproteobacteria
GAT
Ile
>WENV170150008
CEOC01074187
292006
Gammaproteobacteria
TGC
Ala
>WENV170150106
CEOC01085275
180678
Gammaproteobacteria
CCG
Arg
>WENV170150179
CEOC01093389
284022
Gammaproteobacteria
TGT
Thr
>WENV170150192
CEOC01094754
319139
Gammaproteobacteria
GCC
Gly
>WENV170150193
CEOC01094754
481678
Gammaproteobacteria
GCA
Cys
>WENV170150358
CEOC01114357
285547
Gammaproteobacteria
TTG
Gln
>WENV170150626
CEOC01144473
176301
Gammaproteobacteria
GAT
Ile
>WENV170150688
CEOC01149936
292194
Gammaproteobacteria
GGT
Thr
>WENV170150757
CEOC01154193
181365
Gammaproteobacteria
CAT
Met
>WENV170150796
CEOC01157988
180679
Gammaproteobacteria
CCA
Trp
>WENV170150966
CEOC01167753
201377
Gammaproteobacteria
TGG
Pro
>WENV170151172
CEOC01237140
74048
Gammaproteobacteria
CAA
Leu
>WENV170151333
CEOC01303624
311084
Gammaproteobacteria
GCC
Gly
>WENV170151334
CEOC01303624
480629
Gammaproteobacteria
GCA
Cys
>WENV170151446
CEOC01319609
180680
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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