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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170156728
CEOJ01007882
29702
Alphaproteobacteria
GGA
Ser
>WENV170156758
CEOJ01010803
29841
Alphaproteobacteria
GGA
Ser
>WENV170156762
CEOJ01010857
290043
Alphaproteobacteria
TGC
Ala
>WENV170156873
CEOJ01018137
193088
Alphaproteobacteria
GAT
Ile
>WENV170156925
CEOJ01021839
212319
Alphaproteobacteria
GTG
His
>WENV170156976
CEOJ01025266
314617
Alphaproteobacteria
TAC
Val
>WENV170157078
CEOJ01032699
201940
Alphaproteobacteria
CAT
Met
>WENV170157210
CEOJ01043344
481268
Alphaproteobacteria
TCC
Gly
>WENV170157346
CEOJ01054216
197241
Alphaproteobacteria
GGG
Pro
>WENV170157528
CEOJ01067373
314617
Alphaproteobacteria
TAC
Val
>WENV170157592
CEOJ01074537
118213
Alphaproteobacteria
TAG
Leu
>WENV170157625
CEOJ01076508
488318
Alphaproteobacteria
TCC
Gly
>WENV170157637
CEOJ01078209
398994
Alphaproteobacteria
GTT
Asn
>WENV170157667
CEOJ01080774
201940
Alphaproteobacteria
CAT
Met
>WENV170157727
CEOJ01088376
197241
Alphaproteobacteria
GGG
Pro
>WENV170157760
CEOJ01091553
197241
Alphaproteobacteria
GGG
Pro
>WENV170157980
CEOJ01109789
197241
Alphaproteobacteria
GGG
Pro
>WENV170158025
CEOJ01112103
201940
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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