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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170164396
CEOM01306411
123265
Gammaproteobacteria
GAG
Leu
>WENV170163481
CEOM01136239
297858
Gammaproteobacteria
TGC
Ala
>WENV170163053
CEOM01089378
480941
Gammaproteobacteria
TCC
Gly
>WENV170164468
CEOM01349682
299414
Gammaproteobacteria
TTT
Lys
>WENV170164285
CEOM01229499
281276
Gammaproteobacteria
GGT
Thr
>WENV170163478
CEOM01135801
20618
Gammaproteobacteria
GGA
Ser
>WENV170163419
CEOM01130098
292194
Gammaproteobacteria
GGT
Thr
>WENV170164284
CEOM01229499
399250
Gammaproteobacteria
TCC
Gly
>WENV170162418
CEOM01028958
74240
Gammaproteobacteria
CAA
Leu
>WENV170162107
CEOM01003749
74240
Gammaproteobacteria
CAA
Leu
>WENV170162775
CEOM01063394
13452
Gammaproteobacteria
GCT
Ser
>WENV170162463
CEOM01033272
292006
Gammaproteobacteria
TGC
Ala
>WENV170164322
CEOM01251483
480516
Gammaproteobacteria
GCA
Cys
>WENV170163714
CEOM01167671
176545
Gammaproteobacteria
CAT
Met
>WENV170163418
CEOM01130098
481325
Gammaproteobacteria
TCC
Gly
>WENV170164128
CEOM01202455
179888
Gammaproteobacteria
ACG
Arg
>WENV170163657
CEOM01160498
401684
Gammaproteobacteria
CCT
Arg
>WENV170162179
CEOM01009035
481678
Gammaproteobacteria
GCA
Cys
>WENV170164147
CEOM01203498
398943
Gammaproteobacteria
GAC
Val
>WENV170162803
CEOM01065363
177028
Gammaproteobacteria
CAT
Met
>WENV170163633
CEOM01157458
488965
Gammaproteobacteria
GCA
Cys
>WENV170163319
CEOM01120343
488965
Gammaproteobacteria
GCA
Cys
>WENV170162211
CEOM01011148
488965
Gammaproteobacteria
GCA
Cys
>WENV170164101
CEOM01201512
176068
Gammaproteobacteria
TGG
Pro
>WENV170163820
CEOM01178079
180678
Gammaproteobacteria
CCG
Arg
>WENV170163540
CEOM01145403
180678
Gammaproteobacteria
CCG
Arg
>WENV170162278
CEOM01016613
285547
Gammaproteobacteria
TTG
Gln
>WENV170162242
CEOM01013311
8609
Gammaproteobacteria
GCT
Ser
>WENV170162284
CEOM01017018
282018
Gammaproteobacteria
TGT
Thr
>WENV170164097
CEOM01201166
198943
Gammaproteobacteria
CAT
Met
>WENV170163931
CEOM01189206
300318
Gammaproteobacteria
GGC
Ala
>WENV170164031
CEOM01195928
300318
Gammaproteobacteria
GGC
Ala
>WENV170164107
CEOM01201667
300318
Gammaproteobacteria
GGC
Ala
>WENV170163067
CEOM01091387
281939
Gammaproteobacteria
TTT
Lys
>WENV170163122
CEOM01096758
281939
Gammaproteobacteria
TTT
Lys
>WENV170162923
CEOM01076538
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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