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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200804
CEPO01040287
73123
Gammaproteobacteria
CAA
Leu
>WENV170200635
CEPO01000691
20664
Gammaproteobacteria
GCT
Ser
>WENV170200669
CEPO01004963
178164
Gammaproteobacteria
GAT
Ile
>WENV170200805
CEPO01040346
281275
Gammaproteobacteria
TGT
Thr
>WENV170200651
CEPO01002492
299414
Gammaproteobacteria
TTT
Lys
>WENV170200808
CEPO01040346
281276
Gammaproteobacteria
GGT
Thr
>WENV170200681
CEPO01006895
29834
Gammaproteobacteria
GCT
Ser
>WENV170200815
CEPO01042232
218635
Gammaproteobacteria
GAC
Val
>WENV170200801
CEPO01039666
176520
Gammaproteobacteria
CAT
Met
>WENV170200807
CEPO01040346
399250
Gammaproteobacteria
TCC
Gly
>WENV170200714
CEPO01011901
229289
Gammaproteobacteria
TGG
Pro
>WENV170200674
CEPO01005565
480516
Gammaproteobacteria
GCA
Cys
>WENV170200759
CEPO01016130
56694
Gammaproteobacteria
GGA
Ser
>WENV170200806
CEPO01040346
140800
Gammaproteobacteria
GTA
Tyr
>WENV170200661
CEPO01003458
401684
Gammaproteobacteria
CCT
Arg
>WENV170200636
CEPO01000691
232119
Gammaproteobacteria
ACG
Arg
>WENV170200637
CEPO01000691
232119
Gammaproteobacteria
ACG
Arg
>WENV170200646
CEPO01001692
74048
Gammaproteobacteria
CAA
Leu
>WENV170200721
CEPO01013468
306288
Gammaproteobacteria
GCC
Gly
>WENV170200704
CEPO01010487
346373
Gammaproteobacteria
GAA
Phe
>WENV170200809
CEPO01041212
180680
Gammaproteobacteria
GAC
Val
>WENV170200733
CEPO01014831
180680
Gammaproteobacteria
GAC
Val
>WENV170200718
CEPO01011970
180678
Gammaproteobacteria
CCG
Arg
>WENV170200716
CEPO01011901
281283
Gammaproteobacteria
GTG
His
>WENV170200819
CEPO01044013
300318
Gammaproteobacteria
GGC
Ala
>WENV170200726
CEPO01014243
176478
Gammaproteobacteria
CAT
Met
>WENV170200832
CEPO01045889
141076
Gammaproteobacteria
GTA
Tyr
>WENV170200827
CEPO01045619
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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