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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200891
CEPP01005823
363863
Gammaproteobacteria
CCA
Trp
>WENV170200955
CEPP01019611
73123
Gammaproteobacteria
CAA
Leu
>WENV170201133
CEPP01078826
281275
Gammaproteobacteria
TGT
Thr
>WENV170200980
CEPP01028784
180053
Gammaproteobacteria
CAT
Met
>WENV170200857
CEPP01001227
176662
Gammaproteobacteria
ACG
Arg
>WENV170200871
CEPP01002644
178175
Gammaproteobacteria
ACG
Arg
>WENV170201129
CEPP01078607
120827
Gammaproteobacteria
GAG
Leu
>WENV170200856
CEPP01001227
29834
Gammaproteobacteria
GCT
Ser
>WENV170201135
CEPP01078826
399250
Gammaproteobacteria
TCC
Gly
>WENV170201036
CEPP01058607
140925
Gammaproteobacteria
GTA
Tyr
>WENV170200853
CEPP01001222
197551
Gammaproteobacteria
TCT
Arg
>WENV170200877
CEPP01002792
329164
Gammaproteobacteria
TTT
Lys
>WENV170200878
CEPP01002792
329164
Gammaproteobacteria
TTT
Lys
>WENV170200847
CEPP01001203
451238
Gammaproteobacteria
GCC
Gly
>WENV170201115
CEPP01077949
176663
Gammaproteobacteria
GGG
Pro
>WENV170201110
CEPP01077757
480516
Gammaproteobacteria
GCA
Cys
>WENV170200893
CEPP01006580
338424
Gammaproteobacteria
TAC
Val
>WENV170201134
CEPP01078826
126555
Gammaproteobacteria
GTA
Tyr
>WENV170200966
CEPP01020147
243308
Gammaproteobacteria
TGG
Pro
>WENV170201037
CEPP01058607
481325
Gammaproteobacteria
TCC
Gly
>WENV170200938
CEPP01016630
306288
Gammaproteobacteria
GCC
Gly
>WENV170200873
CEPP01002645
302111
Gammaproteobacteria
GTT
Asn
>WENV170201119
CEPP01078165
176664
Gammaproteobacteria
CCT
Arg
>WENV170200914
CEPP01013168
346373
Gammaproteobacteria
GAA
Phe
>WENV170201127
CEPP01078574
176665
Gammaproteobacteria
CGG
Pro
>WENV170201125
CEPP01078524
23169
Gammaproteobacteria
GGA
Ser
>WENV170201136
CEPP01078826
296808
Gammaproteobacteria
GGT
Thr
>WENV170200911
CEPP01012039
281283
Gammaproteobacteria
GTG
His
>WENV170201102
CEPP01076758
176478
Gammaproteobacteria
CAT
Met
>WENV170200864
CEPP01002009
401830
Gammaproteobacteria
TTG
Gln
>WENV170201035
CEPP01058607
282902
Gammaproteobacteria
TGT
Thr
>WENV170200881
CEPP01003881
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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