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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202516
CEPR01051196
176863
Bacteroidota
CAT
Met
>WENV170202314
CEPR01005744
281538
Bacteroidota
GAA
Phe
>WENV170202575
CEPR01060566
303411
Bacteroidota
>WENV170202305
CEPR01003943
281190
Bacteroidota
CAT
Met
>WENV170202366
CEPR01014683
176707
Bacteroidota
TCT
Arg
>WENV170202332
CEPR01008444
291910
Bacteroidota
TTG
Gln
>WENV170202331
CEPR01008443
21789
Bacteroidota
GGA
Ser
>WENV170202633
CEPR01091903
289704
Bacteroidota
GAA
Phe
>WENV170202515
CEPR01051196
488091
Bacteroidota
GCA
Cys
>WENV170202401
CEPR01021831
408604
Bacteroidota
GGT
Thr
>WENV170202342
CEPR01010171
56162
Bacteroidota
TGA
Ser
>WENV170202343
CEPR01010172
299085
Bacteroidota
TTT
Lys
>WENV170202517
CEPR01051196
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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