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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170207894
CEPU01133802
186591
Gammaproteobacteria
ACG
Arg
>WENV170208380
CEPU01274191
74048
Gammaproteobacteria
CAA
Leu
>WENV170207501
CEPU01091803
183804
Gammaproteobacteria
CAT
Met
>WENV170208403
CEPU01277892
176544
Gammaproteobacteria
CAT
Met
>WENV170207512
CEPU01092691
179189
Gammaproteobacteria
CAT
Met
>WENV170206677
CEPU01001391
314350
Gammaproteobacteria
CCA
Trp
>WENV170207954
CEPU01138750
180679
Gammaproteobacteria
CCA
Trp
>WENV170207993
CEPU01142147
180679
Gammaproteobacteria
CCA
Trp
>WENV170207374
CEPU01074610
180678
Gammaproteobacteria
CCG
Arg
>WENV170207610
CEPU01102883
180678
Gammaproteobacteria
CCG
Arg
>WENV170208262
CEPU01229957
401684
Gammaproteobacteria
CCT
Arg
>WENV170207335
CEPU01069532
282894
Gammaproteobacteria
GAA
Phe
>WENV170206806
CEPU01013690
178025
Gammaproteobacteria
GAC
Val
>WENV170207947
CEPU01138031
180680
Gammaproteobacteria
GAC
Val
>WENV170208049
CEPU01147053
481678
Gammaproteobacteria
GCA
Cys
>WENV170208066
CEPU01148136
488965
Gammaproteobacteria
GCA
Cys
>WENV170206762
CEPU01009266
319139
Gammaproteobacteria
GCC
Gly
>WENV170208048
CEPU01147053
319139
Gammaproteobacteria
GCC
Gly
>WENV170206790
CEPU01012266
13452
Gammaproteobacteria
GCT
Ser
>WENV170207668
CEPU01111236
29419
Gammaproteobacteria
GGA
Ser
>WENV170208179
CEPU01182491
20618
Gammaproteobacteria
GGA
Ser
>WENV170207918
CEPU01135331
176796
Gammaproteobacteria
GGG
Pro
>WENV170208195
CEPU01192957
141076
Gammaproteobacteria
GTA
Tyr
>WENV170206904
CEPU01022853
178471
Gammaproteobacteria
GTT
Asn
>WENV170208178
CEPU01182444
73063
Gammaproteobacteria
TAA
Leu
>WENV170208016
CEPU01144096
317792
Gammaproteobacteria
TGC
Ala
>WENV170207310
CEPU01067056
201377
Gammaproteobacteria
TGG
Pro
>WENV170208198
CEPU01196724
281275
Gammaproteobacteria
TGT
Thr
>WENV170207281
CEPU01063284
304066
Gammaproteobacteria
TTT
Lys
>WENV170207282
CEPU01063284
304066
Gammaproteobacteria
TTT
Lys
>WENV170207854
CEPU01129210
281939
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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