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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231868
CEQI01002560
180680
Gammaproteobacteria
GAC
Val
>WENV170231905
CEQI01006172
306288
Gammaproteobacteria
GCC
Gly
>WENV170231906
CEQI01006172
480516
Gammaproteobacteria
GCA
Cys
>WENV170231908
CEQI01006351
180680
Gammaproteobacteria
GAC
Val
>WENV170231935
CEQI01006908
186591
Gammaproteobacteria
ACG
Arg
>WENV170231950
CEQI01008518
282902
Gammaproteobacteria
TGT
Thr
>WENV170231951
CEQI01008518
140925
Gammaproteobacteria
GTA
Tyr
>WENV170231952
CEQI01008518
481325
Gammaproteobacteria
TCC
Gly
>WENV170231954
CEQI01008518
314350
Gammaproteobacteria
CCA
Trp
>WENV170232012
CEQI01013980
281440
Gammaproteobacteria
TGT
Thr
>WENV170232031
CEQI01016617
20968
Gammaproteobacteria
TGA
Ser
>WENV170232055
CEQI01019251
176520
Gammaproteobacteria
CAT
Met
>WENV170232106
CEQI01023985
306288
Gammaproteobacteria
GCC
Gly
>WENV170232142
CEQI01028244
73123
Gammaproteobacteria
CAA
Leu
>WENV170232190
CEQI01034291
306288
Gammaproteobacteria
GCC
Gly
>WENV170232235
CEQI01038438
281275
Gammaproteobacteria
TGT
Thr
>WENV170232267
CEQI01042278
299227
Gammaproteobacteria
GTT
Asn
>WENV170232315
CEQI01048840
176663
Gammaproteobacteria
GGG
Pro
>WENV170232326
CEQI01050311
29834
Gammaproteobacteria
GCT
Ser
>WENV170232342
CEQI01052077
281283
Gammaproteobacteria
GTG
His
>WENV170232356
CEQI01053138
300318
Gammaproteobacteria
GGC
Ala
>WENV170232362
CEQI01053653
74048
Gammaproteobacteria
CAA
Leu
>WENV170232396
CEQI01056788
281282
Gammaproteobacteria
TTC
Glu
>WENV170232400
CEQI01057188
176545
Gammaproteobacteria
CAT
Met
>WENV170232489
CEQI01064703
180053
Gammaproteobacteria
CAT
Met
>WENV170232512
CEQI01068383
299227
Gammaproteobacteria
GTT
Asn
>WENV170232568
CEQI01075134
180678
Gammaproteobacteria
CCG
Arg
>WENV170232569
CEQI01075200
180678
Gammaproteobacteria
CCG
Arg
>WENV170232571
CEQI01075534
218635
Gammaproteobacteria
GAC
Val
>WENV170232647
CEQI01086440
480516
Gammaproteobacteria
GCA
Cys
>WENV170232650
CEQI01086485
74339
Gammaproteobacteria
GAG
Leu
>WENV170232765
CEQI01098185
176665
Gammaproteobacteria
CGG
Pro
>WENV170232839
CEQI01104587
184459
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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