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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170236359
CEQL01250547
178471
Gammaproteobacteria
GTT
Asn
>WENV170235248
CEQL01059404
299227
Gammaproteobacteria
GTT
Asn
>WENV170236036
CEQL01144100
299227
Gammaproteobacteria
GTT
Asn
>WENV170235084
CEQL01041116
350703
Gammaproteobacteria
TTT
Lys
>WENV170236116
CEQL01148099
118413
Gammaproteobacteria
TAG
Leu
>WENV170234668
CEQL01002006
488965
Gammaproteobacteria
GCA
Cys
>WENV170234689
CEQL01003139
176301
Gammaproteobacteria
GAT
Ile
>WENV170235516
CEQL01091127
285547
Gammaproteobacteria
TTG
Gln
>WENV170235540
CEQL01094029
481314
Gammaproteobacteria
GCA
Cys
>WENV170235578
CEQL01097715
117788
Gammaproteobacteria
TAG
Leu
>WENV170234944
CEQL01026712
315775
Gammaproteobacteria
TGT
Thr
>WENV170235315
CEQL01067096
186591
Gammaproteobacteria
ACG
Arg
>WENV170235314
CEQL01067096
186591
Gammaproteobacteria
ACG
Arg
>WENV170236258
CEQL01186448
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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