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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170241747
CEQO01005917
193373
Alphaproteobacteria
CGG
Pro
>WENV170242152
CEQO01034012
296698
Alphaproteobacteria
CGC
Ala
>WENV170243383
CEQO01146900
29841
Alphaproteobacteria
GGA
Ser
>WENV170243698
CEQO01185889
20437
Alphaproteobacteria
GGA
Ser
>WENV170241840
CEQO01013221
201940
Alphaproteobacteria
CAT
Met
>WENV170243052
CEQO01113978
201940
Alphaproteobacteria
CAT
Met
>WENV170243105
CEQO01120008
197241
Alphaproteobacteria
GGG
Pro
>WENV170243714
CEQO01190627
178731
Alphaproteobacteria
GTC
Asp
>WENV170243124
CEQO01121845
400516
Alphaproteobacteria
TTG
Gln
>WENV170241679
CEQO01001400
75222
Alphaproteobacteria
GAG
Leu
>WENV170243675
CEQO01176622
487436
Alphaproteobacteria
TCC
Gly
>WENV170242886
CEQO01095920
305403
Alphaproteobacteria
>WENV170243200
CEQO01131432
121250
Alphaproteobacteria
TAG
Leu
>WENV170242245
CEQO01042658
427571
Alphaproteobacteria
GCC
Gly
>WENV170242217
CEQO01039079
435083
Alphaproteobacteria
>WENV170243004
CEQO01106689
435083
Alphaproteobacteria
>WENV170243322
CEQO01142075
192275
Alphaproteobacteria
GTG
His
>WENV170241812
CEQO01011322
199130
Alphaproteobacteria
GAT
Ile
>WENV170243796
CEQO01220553
400517
Alphaproteobacteria
GGT
Thr
>WENV170242792
CEQO01084780
488318
Alphaproteobacteria
TCC
Gly
>WENV170242806
CEQO01086623
398994
Alphaproteobacteria
GTT
Asn
>WENV170242458
CEQO01058539
296763
Alphaproteobacteria
CCA
Trp
>WENV170242322
CEQO01047557
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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