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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170252349
CEQU01000750
481314
Gammaproteobacteria
GCA
Cys
>WENV170252378
CEQU01002430
74048
Gammaproteobacteria
CAA
Leu
>WENV170252382
CEQU01002930
306288
Gammaproteobacteria
GCC
Gly
>WENV170252391
CEQU01004510
176663
Gammaproteobacteria
GGG
Pro
>WENV170252403
CEQU01005687
176665
Gammaproteobacteria
CGG
Pro
>WENV170252412
CEQU01006197
282550
Gammaproteobacteria
TAC
Val
>WENV170252414
CEQU01006487
480516
Gammaproteobacteria
GCA
Cys
>WENV170252438
CEQU01007827
232119
Gammaproteobacteria
ACG
Arg
>WENV170252485
CEQU01010155
180679
Gammaproteobacteria
CCA
Trp
>WENV170252536
CEQU01013407
306288
Gammaproteobacteria
GCC
Gly
>WENV170252537
CEQU01013407
480516
Gammaproteobacteria
GCA
Cys
>WENV170252541
CEQU01013801
342077
Gammaproteobacteria
TAC
Val
>WENV170252572
CEQU01015802
306288
Gammaproteobacteria
GCC
Gly
>WENV170252695
CEQU01024302
329164
Gammaproteobacteria
TTT
Lys
>WENV170252735
CEQU01026607
180679
Gammaproteobacteria
CCA
Trp
>WENV170252762
CEQU01028194
184459
Gammaproteobacteria
CAT
Met
>WENV170252816
CEQU01031150
176520
Gammaproteobacteria
CAT
Met
>WENV170252827
CEQU01032231
180679
Gammaproteobacteria
CCA
Trp
>WENV170252884
CEQU01035775
186591
Gammaproteobacteria
ACG
Arg
>WENV170252885
CEQU01035775
186591
Gammaproteobacteria
ACG
Arg
>WENV170252955
CEQU01040440
351236
Gammaproteobacteria
TTT
Lys
>WENV170252956
CEQU01040518
140925
Gammaproteobacteria
GTA
Tyr
>WENV170252957
CEQU01040518
481325
Gammaproteobacteria
TCC
Gly
>WENV170252963
CEQU01040923
180053
Gammaproteobacteria
CAT
Met
>WENV170253003
CEQU01043810
338424
Gammaproteobacteria
TAC
Val
>WENV170253082
CEQU01051691
299227
Gammaproteobacteria
GTT
Asn
>WENV170253159
CEQU01058372
176545
Gammaproteobacteria
CAT
Met
>WENV170253364
CEQU01078949
281283
Gammaproteobacteria
GTG
His
>WENV170253461
CEQU01090033
74339
Gammaproteobacteria
GAG
Leu
>WENV170253486
CEQU01092115
346373
Gammaproteobacteria
GAA
Phe
>WENV170253503
CEQU01093386
20273
Gammaproteobacteria
TGA
Ser
>WENV170253547
CEQU01097441
180680
Gammaproteobacteria
GAC
Val
>WENV170253704
CEQU01109138
176664
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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