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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170262908
CERC01004214
400518
Alphaproteobacteria
GAA
Phe
>WENV170262927
CERC01005475
305403
Alphaproteobacteria
>WENV170262949
CERC01006763
281659
Alphaproteobacteria
TGC
Ala
>WENV170262970
CERC01008403
207217
Alphaproteobacteria
CCG
Arg
>WENV170263089
CERC01017987
299509
Alphaproteobacteria
GTT
Asn
>WENV170263198
CERC01025768
487436
Alphaproteobacteria
TCC
Gly
>WENV170263475
CERC01051897
299458
Alphaproteobacteria
TTT
Lys
>WENV170263526
CERC01054912
400517
Alphaproteobacteria
GGT
Thr
>WENV170263529
CERC01055455
282981
Alphaproteobacteria
CCA
Trp
>WENV170263620
CERC01062512
481099
Alphaproteobacteria
TCC
Gly
>WENV170263622
CERC01062521
400544
Alphaproteobacteria
GGT
Thr
>WENV170263792
CERC01085709
178731
Alphaproteobacteria
GTC
Asp
>WENV170263863
CERC01103631
481099
Alphaproteobacteria
TCC
Gly
>WENV170263944
CERC01121883
481098
Alphaproteobacteria
CTG
Gln
>WENV170263948
CERC01122228
121250
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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