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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170279148
CERR01000519
177028
Gammaproteobacteria
CAT
Met
>WENV170279150
CERR01000625
118205
Gammaproteobacteria
GTA
Tyr
>WENV170279153
CERR01000995
178473
Gammaproteobacteria
TGG
Pro
>WENV170279182
CERR01003121
176301
Gammaproteobacteria
GAT
Ile
>WENV170279192
CERR01003884
283224
Gammaproteobacteria
GAA
Phe
>WENV170279196
CERR01003933
311084
Gammaproteobacteria
GCC
Gly
>WENV170279197
CERR01003933
480629
Gammaproteobacteria
GCA
Cys
>WENV170279202
CERR01004810
283226
Gammaproteobacteria
TAC
Val
>WENV170279201
CERR01004810
282683
Gammaproteobacteria
GGC
Ala
>WENV170279253
CERR01008503
74240
Gammaproteobacteria
CAA
Leu
>WENV170279315
CERR01011675
20664
Gammaproteobacteria
GCT
Ser
>WENV170279316
CERR01011675
232119
Gammaproteobacteria
ACG
Arg
>WENV170279317
CERR01011675
232119
Gammaproteobacteria
ACG
Arg
>WENV170279323
CERR01012308
20407
Gammaproteobacteria
TGA
Ser
>WENV170279412
CERR01018609
29695
Gammaproteobacteria
GGA
Ser
>WENV170279411
CERR01018609
362336
Gammaproteobacteria
TTT
Lys
>WENV170279435
CERR01020853
20407
Gammaproteobacteria
TGA
Ser
>WENV170279469
CERR01023724
178472
Gammaproteobacteria
CAT
Met
>WENV170279476
CERR01024837
180679
Gammaproteobacteria
CCA
Trp
>WENV170279550
CERR01032485
180678
Gammaproteobacteria
CCG
Arg
>WENV170279775
CERR01053055
299227
Gammaproteobacteria
GTT
Asn
>WENV170279794
CERR01055997
401684
Gammaproteobacteria
CCT
Arg
>WENV170279852
CERR01061209
178466
Gammaproteobacteria
CCA
Trp
>WENV170279891
CERR01068353
118413
Gammaproteobacteria
TAG
Leu
>WENV170279906
CERR01070355
118207
Gammaproteobacteria
GAG
Leu
>WENV170279956
CERR01076348
178470
Gammaproteobacteria
ACG
Arg
>WENV170279957
CERR01076348
178470
Gammaproteobacteria
ACG
Arg
>WENV170279958
CERR01076348
178470
Gammaproteobacteria
ACG
Arg
>WENV170280102
CERR01092019
180679
Gammaproteobacteria
CCA
Trp
>WENV170280109
CERR01092473
20618
Gammaproteobacteria
GGA
Ser
>WENV170280212
CERR01106424
178538
Gammaproteobacteria
GTC
Asp
>WENV170280311
CERR01115750
400373
Gammaproteobacteria
CCG
Arg
>WENV170280381
CERR01121055
283222
Gammaproteobacteria
GTG
His
>WENV170280438
CERR01125593
74048
Gammaproteobacteria
CAA
Leu
>WENV170280461
CERR01126374
178466
Gammaproteobacteria
CCA
Trp
>WENV170280667
CERR01215693
56694
Gammaproteobacteria
GGA
Ser
>WENV170280769
CERR01253997
178475
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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