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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283499
CERU01024363
487002
Gammaproteobacteria
GCA
Cys
>WENV170283355
CERU01002254
283283
Gammaproteobacteria
TAC
Val
>WENV170283356
CERU01002254
283283
Gammaproteobacteria
TAC
Val
>WENV170283445
CERU01012911
189904
Gammaproteobacteria
CCA
Trp
>WENV170283467
CERU01016621
178539
Gammaproteobacteria
GAC
Val
>WENV170283562
CERU01034842
118127
Gammaproteobacteria
GTA
Tyr
>WENV170283522
CERU01028273
118218
Gammaproteobacteria
TAG
Leu
>WENV170283606
CERU01038556
178175
Gammaproteobacteria
ACG
Arg
>WENV170283795
CERU01112220
178544
Gammaproteobacteria
CAT
Met
>WENV170283572
CERU01036731
481036
Gammaproteobacteria
GCA
Cys
>WENV170283410
CERU01008728
401696
Gammaproteobacteria
TTG
Gln
>WENV170283367
CERU01002965
140925
Gammaproteobacteria
GTA
Tyr
>WENV170283789
CERU01111773
197551
Gammaproteobacteria
TCT
Arg
>WENV170283468
CERU01016643
283282
Gammaproteobacteria
TTT
Lys
>WENV170283369
CERU01003031
178535
Gammaproteobacteria
CCT
Arg
>WENV170283595
CERU01038305
178583
Gammaproteobacteria
ACG
Arg
>WENV170283430
CERU01011110
74339
Gammaproteobacteria
GAG
Leu
>WENV170283796
CERU01112220
118219
Gammaproteobacteria
TAG
Leu
>WENV170283633
CERU01042393
20410
Gammaproteobacteria
TGA
Ser
>WENV170283635
CERU01045014
73498
Gammaproteobacteria
CAA
Leu
>WENV170283437
CERU01011762
480516
Gammaproteobacteria
GCA
Cys
>WENV170283726
CERU01098836
57340
Gammaproteobacteria
GGA
Ser
>WENV170283785
CERU01111612
178543
Gammaproteobacteria
GGG
Pro
>WENV170283622
CERU01038856
280812
Gammaproteobacteria
GAA
Phe
>WENV170283732
CERU01100777
56340
Gammaproteobacteria
GGA
Ser
>WENV170283368
CERU01002965
481325
Gammaproteobacteria
TCC
Gly
>WENV170283586
CERU01037892
118413
Gammaproteobacteria
TAG
Leu
>WENV170283587
CERU01037934
287558
Gammaproteobacteria
TTC
Glu
>WENV170283612
CERU01038722
178549
Gammaproteobacteria
GTT
Asn
>WENV170283527
CERU01028841
205778
Gammaproteobacteria
GTC
Asp
>WENV170283614
CERU01038764
196907
Gammaproteobacteria
GAC
Val
>WENV170283593
CERU01038305
8609
Gammaproteobacteria
GCT
Ser
>WENV170283744
CERU01103653
481314
Gammaproteobacteria
GCA
Cys
>WENV170283626
CERU01038883
119044
Gammaproteobacteria
GTA
Tyr
>WENV170283344
CERU01001205
186591
Gammaproteobacteria
ACG
Arg
>WENV170283345
CERU01001205
186591
Gammaproteobacteria
ACG
Arg
>WENV170283346
CERU01001205
186591
Gammaproteobacteria
ACG
Arg
>WENV170283366
CERU01002965
282902
Gammaproteobacteria
TGT
Thr
>WENV170283636
CERU01045382
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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