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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170287184
CERX01004883
291402
Gammaproteobacteria
GTG
His
>WENV170287220
CERX01006646
176301
Gammaproteobacteria
GAT
Ile
>WENV170287256
CERX01008846
178541
Gammaproteobacteria
CGG
Pro
>WENV170287330
CERX01012941
284022
Gammaproteobacteria
TGT
Thr
>WENV170287339
CERX01013396
186591
Gammaproteobacteria
ACG
Arg
>WENV170287365
CERX01014698
281229
Gammaproteobacteria
GTT
Asn
>WENV170287432
CERX01018363
118413
Gammaproteobacteria
TAG
Leu
>WENV170287487
CERX01021979
180679
Gammaproteobacteria
CCA
Trp
>WENV170287489
CERX01022160
284706
Gammaproteobacteria
GTT
Asn
>WENV170287539
CERX01024406
291402
Gammaproteobacteria
GTG
His
>WENV170287817
CERX01045115
73501
Gammaproteobacteria
GAG
Leu
>WENV170287980
CERX01058144
284706
Gammaproteobacteria
GTT
Asn
>WENV170288035
CERX01062480
284706
Gammaproteobacteria
GTT
Asn
>WENV170288068
CERX01064519
176169
Gammaproteobacteria
>WENV170288147
CERX01071309
284706
Gammaproteobacteria
GTT
Asn
>WENV170288204
CERX01075272
282922
Gammaproteobacteria
GAA
Phe
>WENV170288227
CERX01077045
73123
Gammaproteobacteria
CAA
Leu
>WENV170288230
CERX01077466
178466
Gammaproteobacteria
CCA
Trp
>WENV170288298
CERX01082690
299227
Gammaproteobacteria
GTT
Asn
>WENV170288373
CERX01090443
480516
Gammaproteobacteria
GCA
Cys
>WENV170288408
CERX01092708
73504
Gammaproteobacteria
TAA
Leu
>WENV170288494
CERX01098795
74048
Gammaproteobacteria
CAA
Leu
>WENV170288580
CERX01105996
481314
Gammaproteobacteria
GCA
Cys
>WENV170288590
CERX01106656
480941
Gammaproteobacteria
TCC
Gly
>WENV170288591
CERX01106656
296808
Gammaproteobacteria
GGT
Thr
>WENV170288709
CERX01116126
296680
Gammaproteobacteria
GTT
Asn
>WENV170288765
CERX01121551
178466
Gammaproteobacteria
CCA
Trp
>WENV170288780
CERX01123045
140861
Gammaproteobacteria
GTA
Tyr
>WENV170288823
CERX01125394
283486
Gammaproteobacteria
TGT
Thr
>WENV170288831
CERX01126053
292006
Gammaproteobacteria
TGC
Ala
>WENV170288909
CERX01131883
178538
Gammaproteobacteria
GTC
Asp
>WENV170289024
CERX01139512
56340
Gammaproteobacteria
GGA
Ser
>WENV170289058
CERX01141613
20618
Gammaproteobacteria
GGA
Ser
>WENV170289486
CERX01160676
401696
Gammaproteobacteria
TTG
Gln
>WENV170289580
CERX01194605
401684
Gammaproteobacteria
CCT
Arg
>WENV170289784
CERX01265079
180678
Gammaproteobacteria
CCG
Arg
>WENV170289818
CERX01271139
286980
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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