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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170302863
CESH01215946
421705
Gammaproteobacteria
TCC
Gly
>WENV170301166
CESH01008200
480941
Gammaproteobacteria
TCC
Gly
>WENV170301356
CESH01027731
480941
Gammaproteobacteria
TCC
Gly
>WENV170301830
CESH01074602
20664
Gammaproteobacteria
GCT
Ser
>WENV170301186
CESH01010563
280808
Gammaproteobacteria
>WENV170301638
CESH01054649
314350
Gammaproteobacteria
CCA
Trp
>WENV170301708
CESH01060981
176796
Gammaproteobacteria
GGG
Pro
>WENV170303532
CESH01323440
281437
Gammaproteobacteria
CCA
Trp
>WENV170303730
CESH01465389
178469
Gammaproteobacteria
CAT
Met
>WENV170301285
CESH01021609
176173
Gammaproteobacteria
>WENV170301308
CESH01023735
292194
Gammaproteobacteria
GGT
Thr
>WENV170301236
CESH01015439
20407
Gammaproteobacteria
TGA
Ser
>WENV170301746
CESH01065750
20407
Gammaproteobacteria
TGA
Ser
>WENV170302626
CESH01178636
178470
Gammaproteobacteria
ACG
Arg
>WENV170302936
CESH01230190
281282
Gammaproteobacteria
TTC
Glu
>WENV170301252
CESH01018217
13452
Gammaproteobacteria
GCT
Ser
>WENV170302533
CESH01165426
176663
Gammaproteobacteria
GGG
Pro
>WENV170301305
CESH01023410
317782
Gammaproteobacteria
TAC
Val
>WENV170303726
CESH01463792
56104
Gammaproteobacteria
GGA
Ser
>WENV170303120
CESH01262195
178168
Gammaproteobacteria
ACG
Arg
>WENV170301136
CESH01006597
480516
Gammaproteobacteria
GCA
Cys
>WENV170303702
CESH01449336
56694
Gammaproteobacteria
GGA
Ser
>WENV170302935
CESH01229904
117798
Gammaproteobacteria
CAA
Leu
>WENV170301237
CESH01015500
280812
Gammaproteobacteria
GAA
Phe
>WENV170302864
CESH01215946
301507
Gammaproteobacteria
GGT
Thr
>WENV170303530
CESH01318416
312181
Gammaproteobacteria
TTT
Lys
>WENV170302350
CESH01138524
179888
Gammaproteobacteria
ACG
Arg
>WENV170301635
CESH01054244
316303
Gammaproteobacteria
TTT
Lys
>WENV170301636
CESH01054244
316303
Gammaproteobacteria
TTT
Lys
>WENV170301872
CESH01078784
316303
Gammaproteobacteria
TTT
Lys
>WENV170302846
CESH01213757
176209
Gammaproteobacteria
GGG
Pro
>WENV170301633
CESH01054161
140786
Gammaproteobacteria
>WENV170302503
CESH01161362
481678
Gammaproteobacteria
GCA
Cys
>WENV170302515
CESH01163067
306288
Gammaproteobacteria
GCC
Gly
>WENV170301298
CESH01023044
306288
Gammaproteobacteria
GCC
Gly
>WENV170301278
CESH01020352
306288
Gammaproteobacteria
GCC
Gly
>WENV170301221
CESH01014370
306288
Gammaproteobacteria
GCC
Gly
>WENV170301135
CESH01006597
306288
Gammaproteobacteria
GCC
Gly
>WENV170301281
CESH01020880
176664
Gammaproteobacteria
CCT
Arg
>WENV170302502
CESH01161362
319139
Gammaproteobacteria
GCC
Gly
>WENV170301833
CESH01074921
319139
Gammaproteobacteria
GCC
Gly
>WENV170301360
CESH01028305
319139
Gammaproteobacteria
GCC
Gly
>WENV170301359
CESH01028305
319139
Gammaproteobacteria
GCC
Gly
>WENV170301149
CESH01007618
177028
Gammaproteobacteria
CAT
Met
>WENV170303162
CESH01267984
488965
Gammaproteobacteria
GCA
Cys
>WENV170301244
CESH01017362
488965
Gammaproteobacteria
GCA
Cys
>WENV170301204
CESH01012770
488965
Gammaproteobacteria
GCA
Cys
>WENV170301081
CESH01002893
488965
Gammaproteobacteria
GCA
Cys
>WENV170301724
CESH01063978
282683
Gammaproteobacteria
GGC
Ala
>WENV170303032
CESH01247575
20401
Gammaproteobacteria
GGA
Ser
>WENV170303768
CESH01488172
29695
Gammaproteobacteria
GGA
Ser
>WENV170301809
CESH01071806
73569
Gammaproteobacteria
>WENV170302839
CESH01213092
178436
Gammaproteobacteria
CCG
Arg
>WENV170302038
CESH01097498
178437
Gammaproteobacteria
CAT
Met
>WENV170301119
CESH01005851
290408
Gammaproteobacteria
GCC
Gly
>WENV170301828
CESH01074288
180680
Gammaproteobacteria
GAC
Val
>WENV170301699
CESH01059931
176301
Gammaproteobacteria
GAT
Ile
>WENV170301777
CESH01069066
317792
Gammaproteobacteria
TGC
Ala
>WENV170302037
CESH01097404
180678
Gammaproteobacteria
CCG
Arg
>WENV170301279
CESH01020352
490297
Gammaproteobacteria
GCA
Cys
>WENV170303429
CESH01291907
176665
Gammaproteobacteria
CGG
Pro
>WENV170303248
CESH01279989
176665
Gammaproteobacteria
CGG
Pro
>WENV170303705
CESH01450892
23169
Gammaproteobacteria
GGA
Ser
>WENV170301866
CESH01078447
282018
Gammaproteobacteria
TGT
Thr
>WENV170302375
CESH01143127
281283
Gammaproteobacteria
GTG
His
>WENV170303094
CESH01258804
300318
Gammaproteobacteria
GGC
Ala
>WENV170302870
CESH01217452
300318
Gammaproteobacteria
GGC
Ala
>WENV170302767
CESH01199709
300318
Gammaproteobacteria
GGC
Ala
>WENV170302157
CESH01110983
281939
Gammaproteobacteria
TTT
Lys
>WENV170302465
CESH01156810
179710
Gammaproteobacteria
GAC
Val
>WENV170301815
CESH01073030
179710
Gammaproteobacteria
GAC
Val
>WENV170302269
CESH01126566
176478
Gammaproteobacteria
CAT
Met
>WENV170301485
CESH01040424
176478
Gammaproteobacteria
CAT
Met
>WENV170301389
CESH01031243
118341
Gammaproteobacteria
CAA
Leu
>WENV170302215
CESH01119542
20968
Gammaproteobacteria
TGA
Ser
>WENV170301294
CESH01022617
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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