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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170306088
CESJ01002491
20618
Gammaproteobacteria
GGA
Ser
>WENV170306339
CESJ01023673
282902
Gammaproteobacteria
TGT
Thr
>WENV170306342
CESJ01023774
286980
Gammaproteobacteria
TTT
Lys
>WENV170306346
CESJ01024024
281939
Gammaproteobacteria
TTT
Lys
>WENV170306452
CESJ01033886
314350
Gammaproteobacteria
CCA
Trp
>WENV170306454
CESJ01034031
335783
Gammaproteobacteria
GTT
Asn
>WENV170306479
CESJ01035812
176796
Gammaproteobacteria
GGG
Pro
>WENV170306565
CESJ01045775
20664
Gammaproteobacteria
GCT
Ser
>WENV170306622
CESJ01051608
282902
Gammaproteobacteria
TGT
Thr
>WENV170306955
CESJ01094469
306288
Gammaproteobacteria
GCC
Gly
>WENV170307056
CESJ01112722
186591
Gammaproteobacteria
ACG
Arg
>WENV170307190
CESJ01129162
180681
Gammaproteobacteria
TGG
Pro
>WENV170307191
CESJ01129162
184424
Gammaproteobacteria
TCT
Arg
>WENV170307288
CESJ01137980
180680
Gammaproteobacteria
GAC
Val
>WENV170307348
CESJ01140529
180679
Gammaproteobacteria
CCA
Trp
>WENV170307371
CESJ01141710
306288
Gammaproteobacteria
GCC
Gly
>WENV170307411
CESJ01142950
180679
Gammaproteobacteria
CCA
Trp
>WENV170307530
CESJ01235641
178175
Gammaproteobacteria
ACG
Arg
>WENV170307672
CESJ01280519
287558
Gammaproteobacteria
TTC
Glu
>WENV170307701
CESJ01285083
184459
Gammaproteobacteria
CAT
Met
>WENV170307728
CESJ01286251
176544
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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