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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170326466
CESU01002536
186414
Alphaproteobacteria
CAT
Met
>WENV170327296
CESU01063709
179639
Alphaproteobacteria
ACG
Arg
>WENV170326752
CESU01018144
140876
Alphaproteobacteria
>WENV170327085
CESU01043382
140876
Alphaproteobacteria
>WENV170327364
CESU01071763
140876
Alphaproteobacteria
>WENV170327740
CESU01104128
140876
Alphaproteobacteria
>WENV170327202
CESU01053921
179390
Alphaproteobacteria
TGG
Pro
>WENV170327613
CESU01097545
179390
Alphaproteobacteria
TGG
Pro
>WENV170326412
CESU01000265
408543
Alphaproteobacteria
GAC
Val
>WENV170326754
CESU01018176
229285
Alphaproteobacteria
GGG
Pro
>WENV170327647
CESU01098597
178503
Alphaproteobacteria
GGG
Pro
>WENV170327869
CESU01107475
178503
Alphaproteobacteria
GGG
Pro
>WENV170327177
CESU01050889
281650
Alphaproteobacteria
CCA
Trp
>WENV170326869
CESU01027273
281650
Alphaproteobacteria
CCA
Trp
>WENV170327456
CESU01081187
215287
Alphaproteobacteria
GGG
Pro
>WENV170326886
CESU01028909
212319
Alphaproteobacteria
GTG
His
>WENV170326764
CESU01018876
398994
Alphaproteobacteria
GTT
Asn
>WENV170326800
CESU01021914
398994
Alphaproteobacteria
GTT
Asn
>WENV170327244
CESU01058266
178784
Alphaproteobacteria
CAT
Met
>WENV170326857
CESU01026292
178784
Alphaproteobacteria
CAT
Met
>WENV170326690
CESU01014630
121990
Alphaproteobacteria
TAG
Leu
>WENV170327516
CESU01088543
121990
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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