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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170337062
CETA01063323
296698
Alphaproteobacteria
CGC
Ala
>WENV170337609
CETA01137490
193463
Alphaproteobacteria
CCT
Arg
>WENV170336531
CETA01017985
201940
Alphaproteobacteria
CAT
Met
>WENV170336799
CETA01040272
201940
Alphaproteobacteria
CAT
Met
>WENV170337404
CETA01109728
481802
Alphaproteobacteria
TCC
Gly
>WENV170336925
CETA01051691
77412
Alphaproteobacteria
CAG
Leu
>WENV170337969
CETA01232358
178731
Alphaproteobacteria
GTC
Asp
>WENV170337981
CETA01235610
400516
Alphaproteobacteria
TTG
Gln
>WENV170337493
CETA01122561
178734
Alphaproteobacteria
TGG
Pro
>WENV170336541
CETA01018419
427571
Alphaproteobacteria
GCC
Gly
>WENV170336639
CETA01028141
400517
Alphaproteobacteria
GGT
Thr
>WENV170337255
CETA01091359
481098
Alphaproteobacteria
CTG
Gln
>WENV170337965
CETA01230510
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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