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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170338050
CETB01000810
297858
Gammaproteobacteria
TGC
Ala
>WENV170338052
CETB01000855
176301
Gammaproteobacteria
GAT
Ile
>WENV170338054
CETB01000904
13452
Gammaproteobacteria
GCT
Ser
>WENV170338056
CETB01000904
232119
Gammaproteobacteria
ACG
Arg
>WENV170338055
CETB01000904
232119
Gammaproteobacteria
ACG
Arg
>WENV170338057
CETB01000904
180679
Gammaproteobacteria
CCA
Trp
>WENV170338083
CETB01002219
92638
Gammaproteobacteria
TAA
Leu
>WENV170338082
CETB01002219
481678
Gammaproteobacteria
GCA
Cys
>WENV170338238
CETB01016735
180679
Gammaproteobacteria
CCA
Trp
>WENV170338349
CETB01025105
401684
Gammaproteobacteria
CCT
Arg
>WENV170338502
CETB01036863
280699
Gammaproteobacteria
GGT
Thr
>WENV170338499
CETB01036863
280696
Gammaproteobacteria
TGT
Thr
>WENV170338512
CETB01038376
180678
Gammaproteobacteria
CCG
Arg
>WENV170338549
CETB01040765
74048
Gammaproteobacteria
CAA
Leu
>WENV170338559
CETB01041433
183804
Gammaproteobacteria
CAT
Met
>WENV170338635
CETB01047944
180680
Gammaproteobacteria
GAC
Val
>WENV170338683
CETB01051766
20618
Gammaproteobacteria
GGA
Ser
>WENV170338696
CETB01052203
179710
Gammaproteobacteria
GAC
Val
>WENV170338830
CETB01064678
176301
Gammaproteobacteria
GAT
Ile
>WENV170339158
CETB01097727
398943
Gammaproteobacteria
GAC
Val
>WENV170339185
CETB01100636
400354
Gammaproteobacteria
TTG
Gln
>WENV170339353
CETB01118327
480653
Gammaproteobacteria
GCA
Cys
>WENV170339906
CETB01168154
29392
Gammaproteobacteria
GCT
Ser
>WENV170339959
CETB01170694
299855
Gammaproteobacteria
TAC
Val
>WENV170340312
CETB01326118
176064
Gammaproteobacteria
CAT
Met
>WENV170340326
CETB01330936
329164
Gammaproteobacteria
TTT
Lys
>WENV170340385
CETB01343616
282413
Gammaproteobacteria
GTT
Asn
>WENV170340460
CETB01358171
176065
Gammaproteobacteria
CCT
Arg
>WENV170340470
CETB01358561
56694
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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