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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170368060
CETQ01008253
158246
Gammaproteobacteria
GTC
Asp
>WENV170369057
CETQ01137125
25129
Gammaproteobacteria
TGA
Ser
>WENV170368288
CETQ01035704
20664
Gammaproteobacteria
GCT
Ser
>WENV170368435
CETQ01056391
299414
Gammaproteobacteria
TTT
Lys
>WENV170368305
CETQ01038377
74240
Gammaproteobacteria
CAA
Leu
>WENV170368043
CETQ01007336
13452
Gammaproteobacteria
GCT
Ser
>WENV170369046
CETQ01136903
283966
Gammaproteobacteria
CCT
Arg
>WENV170368208
CETQ01025425
184459
Gammaproteobacteria
CAT
Met
>WENV170368184
CETQ01022128
176545
Gammaproteobacteria
CAT
Met
>WENV170368977
CETQ01133882
401684
Gammaproteobacteria
CCT
Arg
>WENV170368529
CETQ01069899
178169
Gammaproteobacteria
GAC
Val
>WENV170368045
CETQ01007336
232119
Gammaproteobacteria
ACG
Arg
>WENV170368044
CETQ01007336
232119
Gammaproteobacteria
ACG
Arg
>WENV170368452
CETQ01059179
481678
Gammaproteobacteria
GCA
Cys
>WENV170369058
CETQ01137125
306288
Gammaproteobacteria
GCC
Gly
>WENV170368161
CETQ01019166
306288
Gammaproteobacteria
GCC
Gly
>WENV170368150
CETQ01018299
306288
Gammaproteobacteria
GCC
Gly
>WENV170368907
CETQ01127036
334421
Gammaproteobacteria
TGT
Thr
>WENV170368533
CETQ01070249
334421
Gammaproteobacteria
TGT
Thr
>WENV170368611
CETQ01080555
296672
Gammaproteobacteria
GGT
Thr
>WENV170367995
CETQ01002119
180678
Gammaproteobacteria
CCG
Arg
>WENV170368743
CETQ01100896
285547
Gammaproteobacteria
TTG
Gln
>WENV170368181
CETQ01021898
218791
Gammaproteobacteria
ACG
Arg
>WENV170368182
CETQ01021898
218791
Gammaproteobacteria
ACG
Arg
>WENV170368609
CETQ01080555
141076
Gammaproteobacteria
GTA
Tyr
>WENV170368934
CETQ01129139
180679
Gammaproteobacteria
CCA
Trp
>WENV170368285
CETQ01035450
180679
Gammaproteobacteria
CCA
Trp
>WENV170369150
CETQ01202303
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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