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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170370358
CETR01092275
399001
Alphaproteobacteria
GAC
Val
>WENV170370611
CETR01123172
207217
Alphaproteobacteria
CCG
Arg
>WENV170370169
CETR01070041
176225
Alphaproteobacteria
TGG
Pro
>WENV170371066
CETR01234335
29596
Alphaproteobacteria
GCT
Ser
>WENV170369391
CETR01002971
289412
Alphaproteobacteria
CCA
Trp
>WENV170370312
CETR01087163
193463
Alphaproteobacteria
CCT
Arg
>WENV170369482
CETR01010571
193463
Alphaproteobacteria
CCT
Arg
>WENV170370845
CETR01164661
400387
Alphaproteobacteria
GGT
Thr
>WENV170370859
CETR01168979
140963
Alphaproteobacteria
>WENV170370451
CETR01103277
201940
Alphaproteobacteria
CAT
Met
>WENV170370508
CETR01110053
77412
Alphaproteobacteria
CAG
Leu
>WENV170370825
CETR01153574
195445
Alphaproteobacteria
CAT
Met
>WENV170370676
CETR01129910
288727
Alphaproteobacteria
>WENV170369868
CETR01041140
288727
Alphaproteobacteria
>WENV170369395
CETR01003275
193088
Alphaproteobacteria
GAT
Ile
>WENV170370477
CETR01106352
400516
Alphaproteobacteria
TTG
Gln
>WENV170370184
CETR01072106
280784
Alphaproteobacteria
TGC
Ala
>WENV170369448
CETR01007481
78115
Alphaproteobacteria
GAG
Leu
>WENV170369623
CETR01020515
178734
Alphaproteobacteria
TGG
Pro
>WENV170371041
CETR01229023
181950
Alphaproteobacteria
TCT
Arg
>WENV170369632
CETR01021405
121250
Alphaproteobacteria
TAG
Leu
>WENV170369622
CETR01020515
178733
Alphaproteobacteria
CAT
Met
>WENV170370493
CETR01108000
427571
Alphaproteobacteria
GCC
Gly
>WENV170369443
CETR01007238
427571
Alphaproteobacteria
GCC
Gly
>WENV170370147
CETR01067655
140892
Alphaproteobacteria
TAG
Leu
>WENV170370679
CETR01130531
192131
Alphaproteobacteria
GTC
Asp
>WENV170371183
CETR01258874
141247
Alphaproteobacteria
CAA
Leu
>WENV170369452
CETR01007764
73986
Alphaproteobacteria
CAG
Leu
>WENV170370071
CETR01061517
398999
Alphaproteobacteria
GGT
Thr
>WENV170369565
CETR01015748
73167
Alphaproteobacteria
GAG
Leu
>WENV170370375
CETR01095864
73167
Alphaproteobacteria
GAG
Leu
>WENV170370861
CETR01169477
73167
Alphaproteobacteria
GAG
Leu
>WENV170369851
CETR01039415
192275
Alphaproteobacteria
GTG
His
>WENV170370702
CETR01131918
192275
Alphaproteobacteria
GTG
His
>WENV170369657
CETR01023446
398998
Alphaproteobacteria
TTG
Gln
>WENV170370728
CETR01133873
210458
Alphaproteobacteria
CGG
Pro
>WENV170370101
CETR01063764
400544
Alphaproteobacteria
GGT
Thr
>WENV170369440
CETR01006964
481098
Alphaproteobacteria
CTG
Gln
>WENV170369654
CETR01022954
179419
Alphaproteobacteria
TGG
Pro
>WENV170370607
CETR01123056
190625
Alphaproteobacteria
ACG
Arg
>WENV170370141
CETR01067152
325687
Alphaproteobacteria
CCA
Trp
>WENV170369431
CETR01006458
427428
Alphaproteobacteria
GCC
Gly
>WENV170369464
CETR01008896
282658
Alphaproteobacteria
CGT
Thr
>WENV170370105
CETR01064539
212319
Alphaproteobacteria
GTG
His
>WENV170369822
CETR01037184
488318
Alphaproteobacteria
TCC
Gly
>WENV170370568
CETR01119213
398994
Alphaproteobacteria
GTT
Asn
>WENV170370789
CETR01143064
399000
Alphaproteobacteria
TTC
Glu
>WENV170370678
CETR01130403
282981
Alphaproteobacteria
CCA
Trp
>WENV170369829
CETR01037600
282981
Alphaproteobacteria
CCA
Trp
>WENV170370645
CETR01126624
481099
Alphaproteobacteria
TCC
Gly
>WENV170370548
CETR01115854
481099
Alphaproteobacteria
TCC
Gly
>WENV170370159
CETR01069144
404182
Alphaproteobacteria
CAC
Val
>WENV170370787
CETR01141670
411290
Alphaproteobacteria
CAC
Val
>WENV170370236
CETR01078364
398996
Alphaproteobacteria
GCC
Gly
>WENV170370610
CETR01123148
403890
Alphaproteobacteria
GAC
Val
>WENV170370537
CETR01114924
118150
Alphaproteobacteria
TAG
Leu
>WENV170369672
CETR01024498
13340
Alphaproteobacteria
GCT
Ser
>WENV170369918
CETR01046351
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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