This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170419168
CEUM01103890
158246
Gammaproteobacteria
GTC
Asp
>WENV170419882
CEUM01181580
402723
Gammaproteobacteria
TTG
Gln
>WENV170417746
CEUM01000218
179284
Gammaproteobacteria
CAT
Met
>WENV170418438
CEUM01041551
292194
Gammaproteobacteria
GGT
Thr
>WENV170417887
CEUM01009569
282550
Gammaproteobacteria
TAC
Val
>WENV170419396
CEUM01124184
351236
Gammaproteobacteria
TTT
Lys
>WENV170418831
CEUM01071213
292006
Gammaproteobacteria
TGC
Ala
>WENV170417941
CEUM01012688
197498
Gammaproteobacteria
TGG
Pro
>WENV170420042
CEUM01253772
118413
Gammaproteobacteria
TAG
Leu
>WENV170420043
CEUM01253853
401684
Gammaproteobacteria
CCT
Arg
>WENV170420302
CEUM01323412
74048
Gammaproteobacteria
CAA
Leu
>WENV170419700
CEUM01136231
306288
Gammaproteobacteria
GCC
Gly
>WENV170418372
CEUM01036968
306288
Gammaproteobacteria
GCC
Gly
>WENV170420116
CEUM01282760
398943
Gammaproteobacteria
GAC
Val
>WENV170418458
CEUM01042583
334421
Gammaproteobacteria
TGT
Thr
>WENV170418086
CEUM01020089
346373
Gammaproteobacteria
GAA
Phe
>WENV170419127
CEUM01099119
488965
Gammaproteobacteria
GCA
Cys
>WENV170419116
CEUM01098080
370389
Gammaproteobacteria
GGC
Ala
>WENV170418087
CEUM01020161
180680
Gammaproteobacteria
GAC
Val
>WENV170418830
CEUM01071213
176301
Gammaproteobacteria
GAT
Ile
>WENV170419432
CEUM01126727
180678
Gammaproteobacteria
CCG
Arg
>WENV170418239
CEUM01029164
230011
Gammaproteobacteria
ACG
Arg
>WENV170419452
CEUM01128048
281283
Gammaproteobacteria
GTG
His
>WENV170417835
CEUM01005661
342077
Gammaproteobacteria
TAC
Val
>WENV170418986
CEUM01085343
186591
Gammaproteobacteria
ACG
Arg
>WENV170420379
CEUM01328038
282902
Gammaproteobacteria
TGT
Thr
>WENV170419069
CEUM01093282
180679
Gammaproteobacteria
CCA
Trp
>WENV170418765
CEUM01065497
180679
Gammaproteobacteria
CCA
Trp
>WENV170417976
CEUM01015148
180679
Gammaproteobacteria
CCA
Trp
>WENV170419695
CEUM01136065
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK