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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170438973
CEUV01005774
178510
Alphaproteobacteria
ACG
Arg
>WENV170439084
CEUV01011045
178510
Alphaproteobacteria
ACG
Arg
>WENV170440668
CEUV01119849
186414
Alphaproteobacteria
CAT
Met
>WENV170441511
CEUV01192883
293691
Alphaproteobacteria
GAA
Phe
>WENV170439289
CEUV01023375
424450
Alphaproteobacteria
GGT
Thr
>WENV170439395
CEUV01029569
140963
Alphaproteobacteria
>WENV170440714
CEUV01123018
201940
Alphaproteobacteria
CAT
Met
>WENV170440082
CEUV01068730
201940
Alphaproteobacteria
CAT
Met
>WENV170439321
CEUV01025607
201940
Alphaproteobacteria
CAT
Met
>WENV170440810
CEUV01131103
197241
Alphaproteobacteria
GGG
Pro
>WENV170439149
CEUV01014803
197241
Alphaproteobacteria
GGG
Pro
>WENV170441762
CEUV01282200
290043
Alphaproteobacteria
TGC
Ala
>WENV170441463
CEUV01168787
481268
Alphaproteobacteria
TCC
Gly
>WENV170439060
CEUV01010125
481268
Alphaproteobacteria
TCC
Gly
>WENV170440569
CEUV01111393
75222
Alphaproteobacteria
GAG
Leu
>WENV170440206
CEUV01078456
284764
Alphaproteobacteria
CAT
Met
>WENV170441577
CEUV01225784
121250
Alphaproteobacteria
TAG
Leu
>WENV170441569
CEUV01219282
481098
Alphaproteobacteria
CTG
Gln
>WENV170439522
CEUV01037748
118213
Alphaproteobacteria
TAG
Leu
>WENV170439097
CEUV01011931
212319
Alphaproteobacteria
GTG
His
>WENV170440940
CEUV01139522
488318
Alphaproteobacteria
TCC
Gly
>WENV170439006
CEUV01007586
398994
Alphaproteobacteria
GTT
Asn
>WENV170439109
CEUV01012829
398994
Alphaproteobacteria
GTT
Asn
>WENV170440477
CEUV01101616
398994
Alphaproteobacteria
GTT
Asn
>WENV170440079
CEUV01068195
29590
Alphaproteobacteria
CGA
Ser
>WENV170441838
CEUV01292854
296763
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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