This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170458959
CEVC01016918
284706
Gammaproteobacteria
GTT
Asn
>WENV170459104
CEVC01027208
158246
Gammaproteobacteria
GTC
Asp
>WENV170461128
CEVC01297309
73123
Gammaproteobacteria
CAA
Leu
>WENV170460017
CEVC01105204
480941
Gammaproteobacteria
TCC
Gly
>WENV170460332
CEVC01140544
74766
Gammaproteobacteria
CAG
Leu
>WENV170461293
CEVC01347930
281275
Gammaproteobacteria
TGT
Thr
>WENV170460792
CEVC01171441
120827
Gammaproteobacteria
GAG
Leu
>WENV170458770
CEVC01002022
292194
Gammaproteobacteria
GGT
Thr
>WENV170459773
CEVC01082604
401696
Gammaproteobacteria
TTG
Gln
>WENV170461145
CEVC01300491
176069
Gammaproteobacteria
TCT
Arg
>WENV170459823
CEVC01086020
292006
Gammaproteobacteria
TGC
Ala
>WENV170459898
CEVC01094283
480516
Gammaproteobacteria
GCA
Cys
>WENV170461077
CEVC01269311
118413
Gammaproteobacteria
TAG
Leu
>WENV170460982
CEVC01217927
481678
Gammaproteobacteria
GCA
Cys
>WENV170460507
CEVC01157780
176664
Gammaproteobacteria
CCT
Arg
>WENV170460983
CEVC01217927
73504
Gammaproteobacteria
TAA
Leu
>WENV170459822
CEVC01086020
176301
Gammaproteobacteria
GAT
Ile
>WENV170459395
CEVC01051085
282018
Gammaproteobacteria
TGT
Thr
>WENV170460018
CEVC01105204
296808
Gammaproteobacteria
GGT
Thr
>WENV170459798
CEVC01084706
281283
Gammaproteobacteria
GTG
His
>WENV170459398
CEVC01051241
176478
Gammaproteobacteria
CAT
Met
>WENV170460301
CEVC01137239
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK