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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468012
CEVF01004707
292138
Cyanobacteria
CCA
Trp
>WENV170468048
CEVF01006974
118688
Cyanobacteria
TAG
Leu
>WENV170468171
CEVF01015279
73307
Cyanobacteria
CAG
Leu
>WENV170468204
CEVF01017340
118688
Cyanobacteria
TAG
Leu
>WENV170468629
CEVF01049190
177220
Cyanobacteria
CAT
Met
>WENV170468893
CEVF01069362
292138
Cyanobacteria
CCA
Trp
>WENV170469014
CEVF01078508
118720
Cyanobacteria
CAA
Leu
>WENV170469107
CEVF01086141
118688
Cyanobacteria
TAG
Leu
>WENV170469148
CEVF01089481
118688
Cyanobacteria
TAG
Leu
>WENV170469274
CEVF01100317
414584
Cyanobacteria
GAC
Val
>WENV170469330
CEVF01106556
185579
Cyanobacteria
CAT
Met
>WENV170469395
CEVF01111640
177220
Cyanobacteria
CAT
Met
>WENV170469479
CEVF01118772
118688
Cyanobacteria
TAG
Leu
>WENV170469551
CEVF01123982
118688
Cyanobacteria
TAG
Leu
>WENV170469565
CEVF01125489
118720
Cyanobacteria
CAA
Leu
>WENV170469624
CEVF01130180
118720
Cyanobacteria
CAA
Leu
>WENV170469627
CEVF01130543
177220
Cyanobacteria
CAT
Met
>WENV170469733
CEVF01138212
177220
Cyanobacteria
CAT
Met
>WENV170469968
CEVF01151730
299323
Cyanobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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